Evidence map›Paper›PMID 9118950›Full record

ArticleThe EMBO journal1997

The 'polysemous' codon--a codon with multiple amino acid assignment caused by dual specificity of tRNA identity.

T Suzuki, T Ueda, K Watanabe

Abstract read
In one paragraph

Article in The EMBO journal, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. tRNA mbioRxiv : the preprint server for biology · 2023
    Article
  7. Article
  8. Article
  9. Alternative CUG Codon Usage in the Halotolerant YeastJournal of fungi (Basel, Switzerland) · 2022
    Article
  10. The RNA methyltransferase METTL8 installs mNature communications · 2022
    Article
  11. Article
  12. Article
  13. Bacterial translation machinery for deliberate mistranslation of the genetic code.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  14. Review
  15. Review
  16. Review
  17. Review
  18. Review
  19. Article
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

T SuzukiDepartment of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, Japan.
T Ueda
K Watanabe

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In some Candida species, the universal CUG leucine codon is translated as serine. However, in most cases, the serine tRNAs responsible for this non-universal decoding (tRNA(Ser)CAG) accept in vitro not only serine, but also, to some extent, leucine. Nucleotide replacement experiments indicated that m1G37 is critical for leucylation activity. This finding was supported by the fact that the tRNA(Ser)CAGs possessing the leucylation activity always have m1G37, whereas that of Candida cylindracea, which possesses no leucylation activity, has A37. Quantification of defined aminoacetylated tRNAs in cells demonstrated that 3% of the tRNA(Ser)CAGs possessing m1G37 were, in fact, charged with leucine in vivo. A genetic approach using an auxotroph mutant of C.maltosa possessing this type of tRNA(Ser)CAG also suggested that the URA3 gene inactivated due to the translation of CUG as serine was rescued by a slight incorporation of leucine into the polypeptide, which demonstrated that the tRNA charged with multiple amino acids could participate in the translation. These findings provide the first evidence that two distinct amino acids are assigned by a single codon, which occurs naturally in the translation process of certain Candida species. We term this novel type of codon a 'polysemous codon'.

Indexed as

Amino AcidsAmino Acyl-tRNA SynthetasesAnticodonBase SequenceCandidaChromatography, Thin LayerCodonElectrophoresis, Polyacrylamide GelGenetic Complementation TestKineticsLeucineMolecular Sequence DataMutationNucleic Acid ConformationOrotic AcidProtein Biosynthesis5-fluoroorotic acidAmino AcidsAmino Acyl-tRNA SynthetasesAnticodonCodonLeucineOrotic AcidRibonucleasesRNA, Transfer, Amino AcylRNA, Transfer, LeuSerine

Identifiers

PMID9118950
PMCPMC1169711

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.