Evidence map›Paper›PMID 9092633›Full record

ArticleNucleic acids research1997

Isolation and characterization of the human nucleophosmin/B23 (NPM) gene: identification of the YY1 binding site at the 5' enhancer region.

P K Chan, F Y Chan, S W Morris, Z Xie

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. TPL2 kinase is a suppressor of lung carcinogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
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  11. Conventional and nonconventional roles of the nucleolus.International review of cytology · 2002
    Review
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  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

P K ChanDepartment of Pharmacology, Baylor College of Medicine, Houston, TX 77030, USA. pchan@bcm.tmc.edu
F Y Chan
S W Morris
Z Xie
Baylor College of Medicine · US

Funding

DRUG EFFECTS ON FUNCTIONS OF PHOSPHOPROTEIN B23R01CA042476 · NCI · BAYLOR COLLEGE OF MEDICINE · PI CHAN, PUI-KWONG · 1986 to 1996
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NCI NIH HHS CA 42476
6 · The paper itself

Abstract

NPM (nucleophosmin/B23) is a major nucleolar protein which is 20 times more abundant in tumor or proliferating cells than in normal resting cells. Recently, it was found that NPM gene is located at the breakpoints of the t(2:5), t(3:5) and t(5:17) chromosome translocation. To understand the human NPM gene's structure and regulation, four genomic clones were isolated from the human chromosome 5 library and their DNA sequences analyzed. The human NPM gene has 12 exons of sizes ranging from 58 to 358 bp. The chromosome breakpoint for t(2:5) and t(5:17) translocation is within intron 4 and the breakpoint for t(3:5) translocation is within intron 6. The initiation site is located 96 bp upstream from the ATG site. A typical TATA box (at -25 nt) and a GC box (at -65 nt) were identified in the promoter region. We identified two gel-shift bands (A and B) with DNA fragment E (-741/-250 nt) by EMSA. A DNA footprint was observed at (-371/-344 nt) with the nuclear extract. A double stranded DNA with the footprint sequence (-371/-344 nt) competed the formation of gel-shift bands A and B in EMSA suggesting that proteins A and B bind to the footprint region. We confirmed that protein A is transcription factor YY1. These results suggest that YY1 may play a role in NPM gene expression. This is the first report on human NPM gene structure and sequence.

Indexed as

Chromosomes, Human, Pair 5AnimalsBase SequenceBinding SitesChromosome MappingChromosomes, Human, Pair 17Chromosomes, Human, Pair 2Deoxyribonuclease IDNA-Binding ProteinsDNA FootprintingErythroid-Specific DNA-Binding FactorsExonsGenomic LibraryHumansIntronsMolecular Sequence DataDeoxyribonuclease IDNA-Binding ProteinsErythroid-Specific DNA-Binding FactorsNPM1 protein, humanNuclear ProteinsNucleophosminPhosphoproteinsRecombinant Fusion ProteinsTranscription FactorsYY1 protein, humanYy1 protein, ratYY1 Transcription Factor

Identifiers

PMID9092633
PMCPMC146576
OpenAlexW2051191601

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.