ArticleJournal of molecular evolution1997
The 3' ends of tRNA-derived SINEs originated from the 3' ends of LINEs: a new example from the bovine genome.
Article in Journal of molecular evolution, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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23 citing papers in PubMed, 93 citations in OpenAlex.
- Comparison of ruminal microbiota,Frontiers in microbiology · 2024Article
- The non-LTR retrotransposons of Entamoeba histolytica: genomic organization and biology.Molecular genetics and genomics : MGG · 2022Review
- Population analysis of retrotransposons in giraffe genomes supports RTE decline and widespread LINE1 activity in Giraffidae.Mobile DNA · 2021Article
- Article
- CompleteFrontiers in genetics · 2020Article
- LINEs Contribute to the Origins of Middle Bodies of SINEs besides 3' Tails.Genome biology and evolution · 2018Article
- Conserved 3' UTR stem-loop structure in L1 and Alu transposons in human genome: possible role in retrotransposition.BMC genomics · 2016Article
- Mechanism by which a LINE protein recognizes its 3' tail RNA.Nucleic acids research · 2014Article
- RNA-Mediated Gene Duplication and Retroposons: Retrogenes, LINEs, SINEs, and Sequence Specificity.International journal of evolutionary biology · 2013Article
- Expansion of CORE-SINEs in the genome of the Tasmanian devil.BMC genomics · 2012Article
- Retroposed SNOfall--a mammalian-wide comparison of platypus snoRNAs.Genome research · 2008Article
- Poxviruses as possible vectors for horizontal transfer of retroposons from reptiles to mammals.Proceedings of the National Academy of Sciences of the United States of America · 2007Article
- Article
- Genomic expansion of the Bov-A2 retroposon relating to phylogeny and breed management.Mammalian genome : official journal of the International Mammalian Genome Society · 2007Article
- DNA cleavage and Trp53 differentially affect SINE transcription.Genes, chromosomes & cancer · 2007Article
- Core-SINE blocks comprise a large fraction of monotreme genomes; implications for vertebrate chromosome evolution.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2007Article
- Sauria SINEs: Novel short interspersed retroposable elements that are widespread in reptile genomes.Journal of molecular evolution · 2006Article
- BoS: a large and diverse family of short interspersed elements (SINEs) in Brassica oleracea.Journal of molecular evolution · 2005Article
- Article
- Solution structure of an RNA stem-loop derived from the 3' conserved region of eel LINE UnaL2.RNA (New York, N.Y.) · 2004Article
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Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Our group demonstrated recently that the 3' ends of several families of tRNA-derived SINEs (short interspersed repetitive elements) originated from the 3' ends of LINEs (long interspersed repetitive elements) [Ohshima et al. (1996) Mol. Cell. Biol. 16:3756-3764]. Two fully characterized examples of such organization were provided by the tortoise Pol III/SINE and the salmonid HpaI family of SINEs, and two probable examples were provided by the tobacco TS family of SINEs and the salmon SmaI family of SINEs. This organization of SINEs can explain their potential to retropose in the genome since it appears reasonable that the sites for recognition of LINEs by reverse transcriptase should be located within the 3'-end sequences of LINEs. We now add another example to this category of SINEs. In the bovine genome, there are Bov-tA SINEs, which belong to the superfamily of tRNA-derived families of SINEs, and Bov-B LINEs, which were recently demonstrated to belong to a LINE family. Moreover, Bov-tA and Bov-B share the same 3'-end tail. We propose a possible scenario whereby the composite structure of the bovine Bov-tA family of SINEs might have been generated from the Bov-B family of LINEs during evolution.
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