Evidence map›Paper›PMID 9050867›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1997

Multiple promoter elements differentially regulate the expression of the mouse tenascin gene.

D W Copertino, G M Edelman, F S Jones

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Transcriptional regulation of tenascin genes.Cell adhesion & migration · 2015
    Review
  5. Tenascin-C: Form versus function.Cell adhesion & migration · 2015
    Review
  6. Article
  7. Tenascins and the importance of adhesion modulation.Cold Spring Harbor perspectives in biology · 2011
    Review
  8. Article
  9. NFIA controls telencephalic progenitor cell differentiation through repression of the Notch effector Hes1.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2010
    Article
  10. Article
  11. Regulation of the neuronal proteasome by Zif268 (Egr1).The Journal of neuroscience : the official journal of the Society for Neuroscience · 2006
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

D W CopertinoDepartment of Neurobiology, The Scripps Research Institute, La Jolla, CA 92037, USA.
G M Edelman
F S Jones
Scripps Research Institute · US

Funding

CONTROL OF N-CAM BY HOX AND PAX GENES IN TRANSGENIC MICER01HD033576 · NICHD · SCRIPPS RESEARCH INSTITUTE · PI EDELMAN, GERALD · 1995 to 1998
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REGULATION OF GENE EXPRESSION OF NEURAL CAMSR01NS034493 · NINDS · SCRIPPS RESEARCH INSTITUTE · PI JONES, FREDERICK S · 1996 to 1998
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NICHD NIH HHS HD33576NINDS NIH HHS NS34493
6 · The paper itself

Abstract

Tenascin (TN) is an extracellular matrix glycoprotein that is expressed in a characteristic spatiotemporal pattern during development and is up-regulated in the adult during tumorigenesis, wound healing, and nerve regeneration. In previous studies, we identified a promoter within the proximal 250 bp upstream of the mouse TN gene that contains several putative regulatory elements that are conserved among vertebrate TN genes. We have identified four different DNA elements within this promoter and show that they contribute in different ways to TN gene expression in NIH 3T3 fibroblasts, C6 glioma cells, and N2A neuroblastoma cells. These elements comprise a binding site for Krox proteins, one for nuclear factor 1, an octamer motif that binds POU-homeodomain proteins, and a novel TN control element. The nuclear factor 1 and TN control element had positive effects on TN promoter activity and formed similar DNA-protein complexes with nuclear extracts from all three cell lines. The Krox element had a negative effect on TN promoter activity in N2A cells, a positive effect in C6 cells, and no effect in NIH 3T3 cells. Two DNA binding complexes, one correlated with the negative and the other with the positive activities of the Krox element, were found to contain the protein Krox24. In cotransfection experiments, the octamer motif was required for induction of TN promoter activity by the POU-homeodomain protein Brn2 in N2A cells but was inactive in C6 cells. Consistent with these findings, N2A cells transfected with Brn2 formed octamer-binding complexes containing N-Oct3, the transcriptionally active form of Brn2, whereas complexes formed in C6 cells contained only N-Oct5A and N-Oct5B. Our results provide a striking example of the diversity of regulatory mechanisms that can be called forth by combining different promoter motifs with transcriptional activators or repressors.

Indexed as

Immediate-Early Proteins3T3 CellsAnimalsBase SequenceDNA-Binding ProteinsDNA FootprintingEarly Growth Response Protein 1Gene Expression Regulation, DevelopmentalHomeodomain ProteinsMiceMolecular Sequence DataNeurofibromin 1Nuclear ProteinsPOU Domain FactorsPromoter Regions, GeneticProteinsDNA-Binding ProteinsEarly Growth Response Protein 1Egr1 protein, mouseHomeodomain ProteinsImmediate-Early ProteinsNeurofibromin 1Nuclear ProteinsPOU Domain FactorsProteinsTenascintranscription factor Brn-2Transcription Factors

Identifiers

PMID9050867
PMCPMC20005
OpenAlexW1996967756

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.