Evidence map›Paper›PMID 9049308›Full record

ArticleThe EMBO journal1997

In vivo selection of RNAs that localize in the nucleus.

C Grimm, E Lund, J E Dahlberg

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. High-throughput Screening of Sequence Elements Associated with RNA Localization.Computational and structural biotechnology journal · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

C GrimmDepartment of Biomolecular Chemistry, University of Wisconsin, Madison 53706, USA.
E Lund
J E Dahlberg
University of Wisconsin System · US

Funding

RNAS AND PROTEINS BETWEEN THE NUCLEUS AND CYTOPLASMR37GM030220 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI DAHLBERG, JAMES E · 1998 to 2005
$3.1M
STRUCTURE, ORGANIZATION, AND EXPRESSION OF SNRNA GENESR01GM030220 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI DAHLBERG, JAMES E · 1985 to 1997
–
NIGMS NIH HHS GM-30220
6 · The paper itself

Abstract

Nuclear localization of an RNA is affected by cis-acting elements (NLEs) that lead to nuclear import or retention or to blockage of export from the nucleus. To identify such elements, we selected and analyzed transcripts that localized in the nuclei of Xenopus laevis oocytes. The RNAs were isolated from a collection of m7G-capped RNAs in which a combinatorial library (n = 20) of sequences had been inserted. One class of selected RNAs (Sm+) had a consensus Sm binding site (AAUUUUUGG) and bound Sm proteins in the cytoplasm; these RNAs resembled small nuclear RNAs like U1 and U5 RNAs in their bi-directional nucleocytoplasmic transport and their 5'-cap hypermethylation. Another class, Sm- RNAs, contained sequences that masked the m7G-caps of the RNAs and promoted interaction with La protein. These RNAs were retained within nuclei after nuclear injection and were imported when injected into the cytoplasm. Their nuclear import and retention were independent of a 5'-cap, required an imperfect double-stranded stem near the 5' end, and depended on interaction with La protein. Import of the Sm- RNAs, while using the import pathway of proteins, was distinct from that of U6 RNA.

Indexed as

AnimalsAutoantigensBase SequenceBinding SitesBiological TransportCell NucleusConsensus SequenceCytoplasmGuanineHumansMolecular Sequence DataNucleic Acid ConformationOocytesProtein BindingRibonucleoproteinsRibonucleoproteins, Small Nuclear7-methylguanineAutoantigensGuanineRibonucleoproteinsRibonucleoproteins, Small NuclearRNARNA CapsRNA, MessengerRNA, recombinantRNA, Small NuclearSS-B Antigen

Identifiers

PMID9049308
PMCPMC1169680
OpenAlexW2094049826

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.