Evidence map›Paper›PMID 9049260›Full record

ArticlePlant molecular biology1997

Light induces accumulation of isocitrate lyase mRNA in a carotenoid-deficient mutant of Chlamydomonas reinhardtii.

S Petridou, K Foster, K Kindle

Abstract read
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In one paragraph

Article in Plant molecular biology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

S PetridouDepartment of Physics, Syracuse University, NY 13244, USA.
K Foster
K Kindle
Syracuse University · USCornell University · US

Funding

THE BIOSYNTHESIS OF RNAS MECHANISMS AND CONTROLSR01GM010791 · NIGMS · CORNELL UNIVERSITY ITHACA · PI KELLER, ELIZABETH B · 1985 to 1995
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ANALYSIS OF RHODOPSIN-LIKE PHOTORECEPTORS IN ALGAER01GM034218 · NIGMS · SYRACUSE UNIVERSITY AT SYRACUSE · PI FOSTER, KENNETH WILIAM · 1985 to 1991
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NIGMS NIH HHS GM10791NIGMS NIH HHS GM34218
6 · The paper itself

Abstract

A cDNA with sequence similarity to isocitrate lyase (ICL) genes was isolated from the unicellular eukaryotic green alga Chlamydomonas reinhardtii as a light-induced mRNA in the carotenoid biosynthetic mutant strain FN68. The 416 amino acid open reading frame shows significant sequence similarity to isocitrate lyases of bacteria (70%), molds (48%), yeasts (45%), and plants (47%). Expression of the Chlamydomonas ICL gene was tested in the mutant strain FN68, which when grown in the dark fails to accumulate carotenoids and is deficient in chlorophyll, and in CC400G, a strain that accumulates wild-type levels of carotenoids and chlorophyll. In vegetative CC400G cells, ICL mRNA accumulated to a high level in the dark and declined to a barely detectable level within 30 min of exposure to light. This response was more sensitive to white (tungsten filament) or red light than green or blue light, excluding cryptochrome and rhodopsin as the photoreceptor. These results are consistent with excitation by chlorophyll and/or a phytochrome-related photoreceptor. In vegetative FN68 cells, ICL mRNA abundance was very low in the dark, but increased dramatically in response to light. At intensities above threshold, excitation by far-red or red light-induced ICL mRNA accumulation to the highest levels. The threshold of the response was lowest for far-red and blue light. These results are consistent with excitation of a photochromic far-red-responsive pigment.

Indexed as

LightAmino Acid SequenceAnimalsCarotenoidsCells, CulturedChlamydomonas reinhardtiiDNA, ComplementaryGene Expression Regulation, PlantGenes, PlantIsocitrate LyaseMolecular Sequence DataMutationRNA, MessengerCarotenoidsDNA, ComplementaryIsocitrate LyaseRNA, Messenger

Identifiers

PMID9049260
OpenAlexW233116860

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.