Evidence map›Paper›PMID 9049248›Full record

ArticleThe Journal of cell biology1997

Targeting determinants and proposed evolutionary basis for the Sec and the Delta pH protein transport systems in chloroplast thylakoid membranes.

R Henry, M Carrigan, M McCaffrey, X Ma, K Cline

Abstract read
In one paragraph

Article in The Journal of cell biology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

R HenryHorticultural Sciences Department, University of Florida, Gainesville 32611, USA.
M Carrigan
M McCaffrey
X Ma
K Cline

Funding

TARGETING AND ASSEMBLY OF THYLAKOID MEMBRANE PROTEINSR01GM046951 · NIGMS · UNIVERSITY OF FLORIDA · PI CLINE, KENNETH C. · 1992 to 2011
$2.7M
NIGMS NIH HHS R01 GM046951NIGMS NIH HHS R01 GM46951
6 · The paper itself

Abstract

Transport of proteins to the thylakoid lumen is accomplished by two precursor-specific pathways, the Sec and the unique Delta pH transport systems. Pathway selection is specified by transient lumen-targeting domains (LTDs) on precursor proteins. Here, chimeric and mutant LTDs were used to identify elements responsible for targeting specificity. The results showed that: (a) minimal signal peptide motifs consisting of charged N, hydrophobic H, and cleavage C domains were both necessary and sufficient for pathway-specific targeting; (b) exclusive targeting to the Delta pH pathway requires a twin arginine in the N domain and an H domain that is incompatible with the Sec pathway; (c) exclusive targeting to the Sec pathway is achieved by an N domain that lacks the twin arginine, although the twin arginine was completely compatible with the Sec system. A dual-targeting signal peptide, constructed by combining Delta pH and Sec domains, was used to simultaneously compare the transport capability of both pathways when confronted with different passenger proteins. Whereas Sec passengers were efficiently transported by both pathways, Delta pH passengers were arrested in translocation on the Sec pathway. This finding suggests that the Delta pH mechanism evolved to accommodate transport of proteins incompatible with the thylakoid Sec machinery.

Indexed as

Amino Acid SequenceBiological TransportCarrier ProteinsChloroplastsEvolution, MolecularHydrogen-Ion ConcentrationIntracellular Signaling Peptides and ProteinsMembrane ProteinsMolecular Sequence DataPisum sativumPlant ProteinsProtein Sorting SignalsProtein Structure, TertiaryCarrier Proteinsdelta proteinIntracellular Signaling Peptides and ProteinsMembrane ProteinsPlant ProteinsProtein Sorting Signals

Identifiers

PMID9049248
PMCPMC2132503

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.