Evidence map›Paper›PMID 9045807›Full record

ArticleJournal of bacteriology1997

Suppressor gene analysis reveals an essential role for sphingolipids in transport of glycosylphosphatidylinositol-anchored proteins in Saccharomyces cerevisiae.

M Skrzypek, R L Lester, R C Dickson

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
  2. Article
  3. The yeast sphingolipid signaling landscape.Chemistry and physics of lipids · 2014
    Review
  4. Roles for sphingolipids in Saccharomyces cerevisiae.Advances in experimental medicine and biology · 2010
    Review
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  6. Review
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  19. Lipid rafts function in biosynthetic delivery of proteins to the cell surface in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2000
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

M SkrzypekDepartment of Biochemistry, Lucille P. Markey Cancer Center, University of Kentucky Medical Center, Lexington 40536-0084, USA.
R L Lester
R C Dickson
University of Kentucky · USMarkey Cancer Center · US

Funding

MOLECULAR GENETIC ANALYSIS OF YEAST SPHINGOLIPIDSR01GM041302 · NIGMS · UNIVERSITY OF KENTUCKY · PI DICKSON, ROBERT C · 1989 to 2005
$1.9M
NIGMS NIH HHS GM41302
6 · The paper itself

Abstract

Sphingolipids are normally necessary for growth of Saccharomyces cerevisiae cells, but mutant strains that bypass the need for sphingolipids have been identified. Such bypass mutants fail to grow under stressful conditions, including low pH (pH 4.1), when they lack sphingolipids. To begin to understand why sphingolipids seem to be necessary for coping with low-pH stress, we screened a genomic library and selected a suppressor gene, CWP2 (cell wall protein 2), that when present in multiple copies partially compensates for the lack of sphingolipids and enhances survival at low pH. To explain these results, we present evidence that sphingolipids are required for a normal rate of transport of glycosylphosphatidylinositol (GPI)-anchored proteins, including Cwp2 and Gas1/Gpg1, from the endoplasmic reticulum (ER) to the Golgi apparatus. The effect of sphingolipids is specific for transport of GPI-anchored proteins because no effect on the rate of transport of carboxypeptidase Y, a non-GPI-anchored protein, was observed. Since the Gasl protein accumulated in the ER with a GPI anchor in cells lacking sphingolipids, we conclude that sphingolipids are not necessary for anchor attachment. Therefore, sphingolipids must be necessary for a step in formation of COPII vesicles or for their transport to the Golgi apparatus. Our data identify the Cwp2 protein as a vital component in protecting cells from the stress of low pH.

Indexed as

Saccharomyces cerevisiae ProteinsBiological TransportCell MembraneEndoplasmic ReticulumFungal ProteinsGenes, FungalGenes, SuppressorGlycosylphosphatidylinositolsGolgi ApparatusHydrogen-Ion ConcentrationMembrane GlycoproteinsProtein PrecursorsSaccharomyces cerevisiaeSphingolipidsCWP2 protein, S cerevisiaeFungal ProteinsGAS1 protein, S cerevisiaeGlycosylphosphatidylinositolsMembrane GlycoproteinsProtein PrecursorsSaccharomyces cerevisiae ProteinsSphingolipids

Identifiers

PMID9045807
PMCPMC178860
OpenAlexW2169240505

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.