Evidence map›Paper›PMID 9032388›Full record

ArticleJournal of virology1997

Utilization of nonhomologous minus-strand DNA transfer to generate recombinant retroviruses.

P D Yin, V K Pathak, A E Rowan, R J Teufel, W S Hu

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 38 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

P D YinDepartment of Microbiology and Immunology, West Virginia University, Morgantown 26506, USA.
V K Pathak
A E Rowan
R J Teufel
W S Hu
West Virginia University · US

Funding

REVERSE TRANSCRIPTASE TEMPLATE SWITCHING AND FIDELITYR01CA058875 · NCI · WEST VIRGINIA UNIVERSITY · PI PATHAK, VINAY K. · 1998 to 1999
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DISSECTING THE MECHANISMS OF RETROVIRAL RECOMBINATIONR29CA058345 · NCI · WEST VIRGINIA UNIVERSITY · PI HU, WEI-SHAU · 1993 to 1997
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MECHANISMS OF MUTATIONS &HYPERMUTATIONS IN RETROVIRUSESR29CA058875 · NCI · WEST VIRGINIA UNIVERSITY · PI PATHAK, VINAY K. · 1993 to 1997
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NCI NIH HHS CA58345NCI NIH HHS CA58875
6 · The paper itself

Abstract

During reverse transcription, minus-strand DNA transfer connects the sequences located at the two ends of the viral RNA to generate a long terminal repeat. It is thought that the homology in the repeat (R) regions located at the two ends of the viral RNA sequences facilitate minus-strand DNA transfer. In this report, the effects of diminished R-region homology on DNA synthesis and virus titer were examined. A retrovirus vector, PY31, was constructed to contain the 5' and 3' cis-acting elements from Moloney murine sarcoma virus and spleen necrosis virus. These two viruses are genetically distinct, and the two R regions contain little homology. In one round of replication, the PY31 titer was approximately 3,000-fold lower than that of a control vector with highly homologous R regions. The molecular characteristics of the junctions of minus-strand DNA transfer were analyzed in both unintegrated DNA and integrated proviruses. Short stretches of homology were found at the transfer junctions and were likely to be used to facilitate minus-strand DNA transfer. Both minus-strand strong-stop DNA and weak-stop DNA were observed to mediate strand transfer. The ability of PY31 to complete reverse transcription indicates that minus-strand DNA transfer can be used to join sequences from two different viruses to form recombinant viruses. These results suggest the provocative possibility that genetically distinct viruses can interact through this mechanism.

Indexed as

Repetitive Sequences, Nucleic AcidAnimalsBase SequenceDNA, Single-StrandedDNA, ViralGenetic VectorsLeukemia Virus, MurineMiceMolecular Sequence DataMoloney murine sarcoma virusRecombination, GeneticRetroviridaeTemplates, GeneticVirus IntegrationDNA, Single-StrandedDNA, Viral

Identifiers

PMID9032388
PMCPMC191361
OpenAlexW2167837221

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.