Evidence map›Paper›PMID 9032264›Full record

ArticleMolecular and cellular biology1997

Cloning of the novel human myeloid-cell-specific C/EBP-epsilon transcription factor.

A M Chumakov, I Grillier, E Chumakova, D Chih, J Slater, H P Koeffler

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 142 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. The "Janus" Role of C/EBPs Family Members in Cancer Progression.International journal of molecular sciences · 2020
    Review
  6. A mouse model for vitamin D-induced human cathelicidin antimicrobial peptide gene expression.The Journal of steroid biochemistry and molecular biology · 2020
    Article
  7. Haematologica · 2018
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

A M ChumakovDepartment of Medicine, Cedars-Sinai Medical Center, UCLA School of Medicine, Los Angeles, California 90048, USA.
I Grillier
E Chumakova
D Chih
J Slater
H P Koeffler
Cedars-Sinai Medical Center · US

Funding

The UCLA Clinical Nutrition Research UnitP30CA042710 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HEBER, DAVID · 2002 to 2006
$4.0M
VITAMIN/TRACE ELEMENT COREP01CA042710 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HEBER, DAVID NONE · 1985 to 2001
$1.6M
MECHANISMS OF HUMAN PITUITARY TUMORIGENESISP01DK042792 · NIDDK · CEDARS-SINAI MEDICAL CENTER · 1991 to 1995
–
HIV AND MYELOID HEMATOPOIESISR01DK041936 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KOEFFLER, HAROLD H · 1989 to 1993
–
NCI NIH HHS CA42710NIDDK NIH HHS DK41936NIDDK NIH HHS DK42792
6 · The paper itself

Abstract

Chicken NF-M transcription factor, in cooperation with either c-Myb or v-Myb, is active in the combinatorial activation of myeloid-cell-specific genes in heterologous cell types, such as embryonic fibroblasts. In humans, similar effects were observed with homologous members of the CCAAT/enhancer-binding protein (C/EBP) family of transcriptional regulators, especially the human homolog of chicken NF-M, C/EBP-beta (NF-IL6). However, the NF-IL6 gene is expressed in a variety of nonmyeloid cell types and is strongly inducible in response to inflammatory stimuli, making it an unlikely candidate to have an exclusive role as a combinatorial differentiation switch during myelopoiesis in human cells. By using a reverse transcription-PCR-based approach and a set of primers specific for the DNA-binding domains of highly homologous members of the C/EBP family of transcriptional regulators, we have cloned a novel human gene encoding a member of the C/EBP gene family, identified as the human homolog of CRP1, C/EBP-epsilon. A 1.2-kb cDNA encoding full-length human C/EBP-epsilon was cloned from a promyelocyte-late myeloblast-derived lambda gt11 library. Molecular analysis of the cDNA and genomic clones indicated the presence of two exons encoding a protein with an apparent molecular mass of 32 kDa and a pI of 9.5. Primer extension analysis of C/EBP-epsilon mRNA detected a single major transcription start site approximately 200 bp upstream of the start codon. The putative promoter area is similar to those of several other myeloid-cell-specific genes in that it contains no TATAAA box but has a number of purine-rich stretches with multiple sites for the factors of the Ets family of transcriptional regulators. Northern blot analyses indicated a highly restricted mRNA expression pattern, with the strongest expression occurring in promyelocyte and late-myeloblast-like cell lines. Western blot and immunoprecipitation studies using rabbit anti-C/EBP-epsilon antibodies raised against the N-terminal portion of C/EBP-epsilon (amino acids 1 to 115) showed that C/EBP-epsilon is a 32-kDa nuclear phosphoprotein. The human C/EBP-epsilon protein exhibited strong and specific binding to double-stranded DNA containing consensus C/EBP sites. Cotransfection of the C/EBP-epsilon sense and antisense expression constructs together with chloramphenicol acetyltransferase reporter vectors containing myeloid-cell-specific c-mim and human myeloperoxidase promoters suggested a role for C/EBP-epsilon transcription factor in the regulation of a subset of myeloid-cell-specific genes. Transient tranfection of a promyelocyte cell line (NB4) with a C/EBP-epsilon expression plasmid increased cell growth by sevenfold, while antisense C/EBP-epsilon caused a fivefold decrease in clonal growth of these cells.

Indexed as

AcetyltransferasesCCAAT-Enhancer-Binding ProteinsGene Expression RegulationGranulocytesAmino Acid SequenceAnimalsAntibody SpecificityBase SequenceCell LineCloning, MolecularExonsGenesHL-60 CellsHumansMiceMolecular Sequence DataAcetyltransferasesCCAAT-Enhancer-Binding ProteinsCEBPE protein, humanCebpe protein, mousemim-1 protein, Gallus gallusPeroxidasePhosphoproteinsProteinsRecombinant Fusion ProteinsRNA, MessengerTranscription Factors

Identifiers

PMID9032264
PMCPMC231862
OpenAlexW2161657103

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.