Evidence map›Paper›PMID 9023349›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1997

Nef proteins encoded by human and simian immunodeficiency viruses induce the accumulation of endosomes and lysosomes in human T cells.

A Sanfridson, S Hester, C Doyle

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 62 citations in OpenAlex.

  1. Trial
  2. Article
  3. Lysosomes' fallback strategies: more than just survival or death.Frontiers in cell and developmental biology · 2025
    Review
  4. Review
  5. Article
  6. Review
  7. The Role of Viral Proteins in the Regulation of Exosomes Biogenesis.Frontiers in cellular and infection microbiology · 2021
    Review
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Microvesicles and viral infection.Journal of virology · 2011
    Review
  18. Autophagy and HIV.Seminars in cell & developmental biology · 2010
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

A SanfridsonDepartment of Immunology, Duke University Medical Center, Durham, NC 27710, USA.
S Hester
C Doyle
Duke University Hospital · USDuke Medical Center · US

Funding

INDUCTION OF MULTIVESCULAR GRANULES BY HIV/SIV NEFR21AI038696 · NIAID · DUKE UNIVERSITY · PI DOYLE, CAROLYN F · 1996 to 1996
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TUMOR IMMUNOLOGY AND IMMUNOGENETICST32CA009058 · NCI · DUKE UNIVERSITY · PI DAWSON, JEFFREY R · 1985 to 1999
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NCI NIH HHS 5T32CA09058NCI NIH HHS T32 CA009058NIAID NIH HHS AI38696
6 · The paper itself

Abstract

The nef gene of human and simian immunodeficiency viruses encodes a 27-32-kDa myristoylated protein that is expressed at high levels early after infection. Many functions have been ascribed to the Nef protein, including the down-regulation of cell surface CD4 and a role in viral infectivity. This report describes a novel effect of the Nef protein on human T cells. Electron microscopy was used to examine human T cell lines stably expressing functionally active simian or human immunodeficiency virus type 1 Nef proteins. These studies revealed that the subcellular morphology of Nef-expressing cells was dramatically altered as compared with control cells. The Nef-expressing cells contained numerous membrane-bound vesicles prominently displayed throughout the cytoplasm. The vesicles were analyzed by immunoelectron microscopy (IEM) and by the accumulation of internalized nonspecific membrane tracer, and thus identified as late endosomes and lysosomes. The accumulation of endosomes and lysosomes in response to the expression of Nef was a consistent finding, observed with several different viral isolates and human T cell lines.

Indexed as

HIV-1Simian Immunodeficiency VirusAntigens, CDCathepsin DCell LineEndosomesFerritinsGene Products, nefGenetic VectorsHumansIntracellular MembranesLysosomal Membrane ProteinsLysosomesMembrane Glycoproteinsnef Gene Products, Human Immunodeficiency VirusRecombinant Fusion ProteinsAntigens, CDCathepsin DFerritinsGene Products, nefLysosomal Membrane ProteinsMembrane Glycoproteinsnef Gene Products, Human Immunodeficiency Viruspolycationic ferritinRecombinant Fusion Proteins

Identifiers

PMID9023349
PMCPMC19606
OpenAlexW2082398027

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.