Evidence map›Paper›PMID 9023210›Full record

ArticleJournal of bacteriology1997

Identification and characterization of the dTDP-rhamnose biosynthesis and transfer genes of the lipopolysaccharide-related rfb locus in Leptospira interrogans serovar Copenhageni.

M Mitchison, D M Bulach, T Vinh, K Rajakumar, S Faine, B Adler

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 68 citations in OpenAlex.

  1. Shaping the future ofJournal of medical microbiology · 2025
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  3. Genetic structure and diversity of theLife science alliance · 2024
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  4. Horizontal transfer of theLife science alliance · 2023
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  5. Review
  6. Article
  7. Article
  8. Creating a Library of Random Transposon Mutants in Leptospira.Methods in molecular biology (Clifton, N.J.) · 2020
    Article
  9. Article
  10. PathogenicOpen veterinary journal · 2018
    Review
  11. Article
  12. Genomic Analysis of a New Serovar ofFrontiers in microbiology · 2017
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Genome features of Leptospira interrogans serovar Copenhageni.Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica · 2004
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

M MitchisonDepartment of Microbiology, Monash University, Clayton, Victoria, Australia.
D M Bulach
T Vinh
K Rajakumar
S Faine
B Adler
Monash University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immunity to leptospirosis is principally humorally mediated and involves opsonization of leptospires for phagocytosis by macrophages and neutrophils. The only protective antigen identified to date is the leptospiral lipopolysaccharide (LPS), which biochemically resembles typical gram-negative LPS but has greatly reduced endotoxic activity. Little is known about the structure of leptospiral LPS. A 2.1-kb EcoRI fragment from the chromosome of serovar Copenhageni was cloned in pUC18 in Escherichia coli, after which flanking regions were cloned from a genomic library constructed in bacteriophage lambda GEM12. Sequence analysis identified four open reading frames which showed similarity to the rfbC, rfbD, rfbB, and rfbA genes, transcribed in that order, which encode the four enzymes involved in the biosynthesis of dTDP-rhamnose for the assembly of LPS in Salmonella enterica, E. coli, and Shigella flexneri. An additional open reading frame downstream of the rfbCDBA locus showed similarity with the rhamnosyltransferase genes of Shigella and Yersinia enterocolitica but not Salmonella. Comparison of deduced amino acid sequences showed up to 85% similarity of the leptospiral proteins with those of other gram-negative bacteria. Polyacrylamide gel electrophoresis of recombinant clones identified the putative RfbCDBA proteins, while reverse transcriptase-mediated PCR analysis indicated that the rfbCDBA gene cluster was expressed in Leptospira. Moreover, it could restore normal LPS phenotype to a defined rfbB::Tn5 mutant of S. flexneri which was deficient in all four genes, thereby confirming the functional identification of a part of the leptospiral rfb locus.

Indexed as

Genes, BacterialATP-Binding Cassette TransportersBacterial ProteinsCarbohydrate DehydrogenasesCarbohydrate EpimerasesCloning, MolecularEscherichia coliGenetic Complementation TestHexosyltransferasesHydro-LyasesLeptospira interrogansLipopolysaccharidesMannose-6-Phosphate IsomeraseMolecular Sequence DataNucleoside Diphosphate SugarsNucleotidyltransferasesATP-Binding Cassette TransportersBacterial ProteinsCarbohydrate DehydrogenasesCarbohydrate EpimerasesdTDP-4-ketorhamnose 3,5-epimerasedTDP-D-glucose synthasedTDPglucose 4,6-dehydrataseHexosyltransferasesHydro-LyasesLipopolysaccharidesLPS rhamnosyltransferasesMannose-6-Phosphate IsomeraseNucleoside Diphosphate SugarsNucleotidyltransferasesRNA, BacterialRNA, MessengerTDP-deoxyglucose epimerasethymidine diphosphate rhamnoseThymine Nucleotides

Identifiers

PMID9023210
PMCPMC178824
OpenAlexW2118092348

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.