Evidence map›Paper›PMID 9023194›Full record

ArticleJournal of bacteriology1997

Biological function of the dTDP-rhamnose synthesis pathway in Streptococcus mutans.

Y Tsukioka, Y Yamashita, T Oho, Y Nakano, T Koga

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
12.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 118 citations in OpenAlex.

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  12. Genome Structure of the Opportunistic PathogenFrontiers in microbiology · 2018
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  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Y TsukiokaDepartment of Preventive Dentistry, Kyushu University Faculty of Dentistry, Fukuoka, Japan.
Y Yamashita
T Oho
Y Nakano
T Koga
Kyushu University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have cloned a new gene locus that comprises three genes concerned with the biosynthesis of the serotype c-specific polysaccharide antigen in Streptococcus mutans. The genes encode proteins exhibiting significant homology to the rfbA, rfbB, and rfbD gene products that are involved in the anabolism of dTDP-L-rhamnose from D-glucose-1-phosphate. This anabolism pathway pertains to biosynthesis of the O antigen of lipopolysaccharide in gram-negative bacteria. The cell extract of Escherichia coli expressing each of the cloned genes of S. mutans exhibited enzymatic activity corresponding to the homologous counterpart of the rfb gene products. Rhamnose was not detected in the cell wall preparation purified from the mutant in which each of the three cloned genes was insertionally inactivated. Rabbit antiserum against S. mutans serotype c-specific antigen did not react with the autoclaved extracts from these mutants. These results indicate that the gene products identified in the present study are involved in the dTDP-L-rhamnose synthesis pathway and that the pathway relates to the biosynthesis of the serotype-specific polysaccharide antigen of S. mutans. Southern hybridization analysis revealed that genes homologous to the cloned genes involved in the dTDP-L-rhamnose synthesis pathway were widely distributed in a variety of streptococci. This is the first report of the biological function of the dTDP-rhamnose pathway in streptococci.

Indexed as

Genes, BacterialBacterial ProteinsBlotting, SouthernCarbohydrate DehydrogenasesCarbohydrate EpimerasesCarbohydratesCell WallCloning, MolecularEscherichia coliHydro-LyasesMannose-6-Phosphate IsomeraseMolecular Sequence DataMutagenesis, InsertionalNucleoside Diphosphate SugarsNucleotidyltransferasesOpen Reading FramesBacterial ProteinsCarbohydrate DehydrogenasesCarbohydrate EpimerasesCarbohydratesdTDP-4-ketorhamnose 3,5-epimerasedTDP-D-glucose synthasedTDPglucose 4,6-dehydrataseHydro-LyasesMannose-6-Phosphate IsomeraseNucleoside Diphosphate SugarsNucleotidyltransferasesPolysaccharides, BacterialRhamnosethymidine diphosphate rhamnoseThymine Nucleotides

Identifiers

PMID9023194
PMCPMC178808
OpenAlexW1572124882

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.