Evidence map›Paper›PMID 9020084›Full record

ArticleScience (New York, N.Y.)1997

RETRACTED: Defective transcription-coupled repair of oxidative base damage in Cockayne syndrome patients from XP group G.

P K Cooper, T Nouspikel, S G Clarkson, S A Leadon

RetractedAbstract readRetracted Publication
PubMed Publisher
In one paragraph

Article in Science (New York, N.Y.), 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
15.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 306 citations in OpenAlex.

  1. Article
  2. The capacity of oocytes for DNA repair.Cellular and molecular life sciences : CMLS · 2018
    Review
  3. Review
  4. Review
  5. Article
  6. Somatic mutations in aging, cancer and neurodegeneration.Mechanisms of ageing and development · 2012
    Review
  7. Article
  8. The obesity-associated Fto gene is a transcriptional coactivator.Biochemical and biophysical research communications · 2010
    Article
  9. Article
  10. XPG: its products and biological roles.Advances in experimental medicine and biology · 2008
    Review
  11. Increased apoptosis, p53 up-regulation, and cerebellar neuronal degeneration in repair-deficient Cockayne syndrome mice.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
  12. Review
  13. Nucleotide excision repair and cancer.Journal of molecular histology · 2006
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Cockayne syndrome group B cellular and biochemical functions.American journal of human genetics · 2003
    Review
  19. Methylated DNA-binding domain 1 and methylpurine-DNA glycosylase link transcriptional repression and DNA repair in chromatin.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Retraction · 2005-06-17Investigation by Company/Institution · Investigation by Journal/Publisher · Investigation by ORI · Misconduct - Official Investigation(s) and/or Finding(s) · Misconduct by Author · Unreliable Results and/or Conclusions · · NIH Finding of misconduct for Steven A Leadon, 2/9/2006; Notice paywalled as of 4.3.2022;
  • Commented on by
  • Retracted
5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

P K CooperLife Sciences Division, Building 934, Lawrence Berkeley National Laboratory, University of California, 1 Cyclotron Road, Berkeley, CA 94720, USA.
T Nouspikel
S G Clarkson
S A Leadon
University of Geneva · CHLawrence Berkeley National Laboratory · USUniversity of North Carolina at Chapel Hill · US

Funding

Mechanisms for Transcription-Coupled Repair in Human CellsR01CA063503 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI COOPER, PRISCILLA K. · 1994 to 2010
$3.9M
TRANSCRIPTION COUPLED REPAIR OF EUKARYOTIC CELLSR01CA040453 · NCI · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI LEADON, STEVEN A · 1985 to 2002
$629k
NCI NIH HHS CA40453NCI NIH HHS CA63503
6 · The paper itself

Abstract

In normal human cells, damage due to ultraviolet light is preferentially removed from active genes by nucleotide excision repair (NER) in a transcription-coupled repair (TCR) process that requires the gene products defective in Cockayne syndrome (CS). Oxidative damage, including thymine glycols, is shown to be removed by TCR in cells from normal individuals and from xeroderma pigmentosum (XP)-A, XP-F, and XP-G patients who have NER defects but not from XP-G patients who have severe CS. Thus, TCR of oxidative damage requires an XPG function distinct from its NER endonuclease activity. These results raise the possibility that defective TCR of oxidative damage contributes to the developmental defects associated with CS.

Indexed as

DNA RepairTranscription, GeneticCockayne SyndromeDNADNA-Binding ProteinsDNA DamageDNA Excision Repair Protein ERCC-5EndonucleasesGenetic Complementation TestHumansHydrogen PeroxideMutationNuclear ProteinsOxidation-ReductionTranscription FactorsUltraviolet RaysDNADNA-Binding ProteinsDNA Excision Repair Protein ERCC-5EndonucleasesHydrogen PeroxideNuclear ProteinsTranscription Factors

Identifiers

PMID9020084
OpenAlexW2007998684

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.