Evidence map›Paper›PMID 9016873›Full record

ArticleThe Journal of experimental medicine1997

The transcriptional promoter regulates hypermutation of the antibody heavy chain locus.

K Tumas-Brundage, T Manser

Abstract read
In one paragraph

Article in The Journal of experimental medicine, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

  1. Promoter Proximity Defines Mutation Window for VJournal of immunology (Baltimore, Md. : 1950) · 2022
    Article
  2. Review
  3. JMolecular immunology · 2018
    Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. AID and Apobec3G haphazard deamination and mutational diversity.Cellular and molecular life sciences : CMLS · 2013
    Review
  10. Review
  11. Review
  12. Review
  13. Review
  14. AID and somatic hypermutation.Advances in immunology · 2010
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

K Tumas-BrundageDepartment of Microbiology and Immunology, Kimmel Cancer Institute, Thomas Jefferson Medical College, Philadelphia, Pennsylvania 19107, USA.
T Manser

Funding

TRAINING PROGRAMS IN CANCER IMMUNOLOGYT32CA009683 · NCI · THOMAS JEFFERSON UNIVERSITY · PI EISENLOHR, LAURENCE CRANE · 1993 to 2007
$1.5M
EXPRESSION OF ANTIBODY DIVERSITY DURING IMMUNE RESPONSESR01AI023739 · NIAID · THOMAS JEFFERSON UNIVERSITY · PI MANSER, TIMOTHY L · 1986 to 2001
$481k
NCI NIH HHS CA09683NCI NIH HHS T32 CA009683NIAID NIH HHS AI23739
6 · The paper itself

Abstract

A somatic process introduces mutations into antibody variable (V) region genes at a high rate in many vertebrates, and is a major source of antibody diversity. The mechanism of this hypermutation process remains enigmatic, although retrospective studies and transgenic experiments have recently suggested a role for transcriptional regulatory elements. Here, we demonstrate that mouse heavy (H) chain loci in which the natural VH promoter has been replaced by a heterologous promoter undergo hypermutation. However, while the distribution of mutation in such loci appears normal, the frequency of mutation does not. Conversely, moving the VH promoter 750 bp upstream of its normal location results in a commensurate change in the site specificity of hypermutation in H chain loci, and the foreign DNA inserted into the VH leader intron to produce this promoter displacement is hypermutated in a manner indistinguishable from natural Ig DNA. These data establish a direct mechanistic link between the IgH transcription and hypermutation processes.

Indexed as

MutationPromoter Regions, GeneticTranscription, GeneticAnimalsBase SequenceDNAFounder EffectImmunoglobulin Heavy ChainsMiceMice, Inbred C3HMice, Inbred C57BLMice, TransgenicMolecular Sequence DataDNAImmunoglobulin Heavy Chains

Identifiers

PMID9016873
PMCPMC2196128

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.