Evidence map›Paper›PMID 9006018›Full record

ArticleJournal of bacteriology1997

Analysis of the cbbXYZ operon in Rhodobacter sphaeroides.

J L Gibson, F R Tabita

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. TheFrontiers in plant science · 2018
    Article
  3. From chaperonins to Rubisco assembly and metabolic repair.Protein science : a publication of the Protein Society · 2017
    Review
  4. Review
  5. Rubisco Activases: AAA+ Chaperones Adapted to Enzyme Repair.Frontiers in molecular biosciences · 2017
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

J L GibsonDepartment of Microbiology and the Plant Molecular Biology/Biotechnology Program, The Ohio State University, Columbus 43210, USA.
F R Tabita
The Ohio State University · US

Funding

NIGMS NIH HHS GM45404
6 · The paper itself

Abstract

Three genes, cbbX, cbbY, and cbbZ were found downstream from the form I ribulose 1,5-bisphosphate carboxylase/oxygenase (RubisCO) genes of Rhodobacter sphaeroides. As in chemoautotrophic bacteria, cbbZ was shown to encode phosphoglycolate phosphatase (PGP), whereas the identities of cbbX and cbbY are not known. To determine the physiological function of the cbbXYZ gene products, we constructed R. sphaeroides strains in which the genes were inactivated and characterized the resultant mutant strains according to growth phenotype and levels of RubisCO and PGP. Only a mutation in cbbX resulted in a discernible phenotype, namely, impaired photoautotrophic growth. No PGP activity was observed in any of the mutants, suggesting that the three genes are transcriptionally linked. Studies with a spontaneous chemoautotrophic competent derivative of the CBBX mutant suggested that the cbbXYZ gene products are not essential for chemoautotrophic growth. PGP activity determined in the wild-type strain grown under a variety of growth conditions, and in various strains containing mutations in Calvin-Benson-Bassham cycle structural and regulatory genes, indicated that transcription of the cbb(I) operon influenced expression of the downstream cbbXYZ operon.

Indexed as

Genes, BacterialOperonAmino Acid SequenceBacterial ProteinsBase SequenceCarbon DioxideMolecular Sequence DataMutagenesis, InsertionalPhosphoric Monoester HydrolasesPhotosynthesisRhodobacter sphaeroidesRibulose-Bisphosphate CarboxylaseSequence Analysis, DNASequence Homology, Amino AcidBacterial ProteinsCarbon DioxideCbbX protein, Rhodobacter sphaeroidesCbbY protein, Rhodobacter sphaeroidesphosphoglycolate phosphatasePhosphoric Monoester HydrolasesRibulose-Bisphosphate Carboxylase

Identifiers

PMID9006018
PMCPMC178745
OpenAlexW1552884459

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.