Evidence map›Paper›PMID 8990397›Full record

ArticleRNA (New York, N.Y.)1997

Evidence for light/redox-regulated splicing of psbA pre-RNAs in Chlamydomonas chloroplasts.

N N Deshpande, Y Bao, D L Herrin

Open access · greenAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 69 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  5. Review
  6. Genetic organization of the psbAD region in phages infecting marine Synechococcus strains.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
  7. Article
  8. Chloroplast RNA processing and stability.Photosynthesis research · 2004
    Article
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  10. Article
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  12. Article
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

N N DeshpandeDepartment of Botany, University of Texas at Austin, 78713, USA.
Y Bao
D L Herrin
The University of Texas at Austin · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Efficient splicing in vivo of most self-splicing group I introns is believed to require proteins, raising the possibility that splicing could be regulated; however, examples of such regulation have been lacking. The Chlamydomonas reinhardtii chloroplast psbA gene contains four large group I introns that self-splice efficiently in vitro, but only under nonphysiological conditions. The psbA gene encodes the D1 protein of photosystem II, which is synthesized at very high rates in the light in order to replace photodamaged protein. We show that psbA pre-mRNAs, containing one or more introns, accumulate in wild-type cells in the dark, apparently due to rate-limited splicing. Analysis of the pre-RNAs indicates that splicing of the four introns does not follow a strict order. Exposure of cells to light induced rapid (15-20 min) decreases in precursor levels of approximately 3-5-fold (depending on the intron), which were accompanied by transient increases in free intron levels. Because light also stimulated psbA transcription approximately 2-fold over the same period, the data suggests that light increases the splicing efficiency of psbA introns approximately 6-10-fold. Similar estimates of the extent of light stimulation were obtained by analyzing precursor decay rates in the presence of actinomycin D. The effect of light is specific for psbA introns, because levels of unspliced 23S pre-RNA did not decrease. The light-induced increase in psbA pre-RNA processing was abolished by inhibitors of photosynthetic electron transport, but not by the ATP synthesis inhibitor, carbonylcyanide m-chlorophenylhydrazone, which actually promoted pre-RNA processing in the dark. Finally, nonphotosynthetic mutants, including the tscA-lacking photosystem I mutant, H13, did not show evidence of light-stimulated RNA processing. However, the light response was restored in photosynthetic transformants of H13 that had been complemented with the tscA gene. These data suggest strongly that light coordinately stimulates splicing of all four psbA introns. Moreover, they demonstrate that this response to light is mediated by photosynthetic electron transport. The implications of these results for the regulation of psbA gene expression are discussed.

Indexed as

LightRNA SplicingAnimalsChlamydomonas reinhardtiiChloroplastsElectron TransportGene Expression Regulation, PlantIntronsOxidation-ReductionPhotic StimulationPhotosynthesisPhotosynthetic Reaction Center Complex ProteinsPhotosystem II Protein ComplexPhotosystem I Protein ComplexPlant ProteinsPolymerase Chain ReactionPhotosynthetic Reaction Center Complex ProteinsPhotosystem II Protein ComplexPhotosystem I Protein ComplexPlant ProteinsProtozoan ProteinsRNA, PlantRNA PrecursorsRNA, ProtozoantscA protein, Chlamydomonas

Identifiers

PMID8990397
PMCPMC1369460
OpenAlexW2105585246

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.