Evidence map›Paper›PMID 8939365›Full record

ArticleChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology1996

Construction of chromosome-specific DNA libraries covering the whole genome of field bean (Vicia faba L.).

J Macas, G Gualberti, M Nouzová, P Samec, S Lucretti, J Dolezel

Abstract read
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In one paragraph

Article in Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 50 citations in OpenAlex.

  1. Flow Cytometric Analysis and Sorting of Plant Chromosomes.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  2. Chromosome analysis and sorting.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2021
    Review
  3. Chromosomes in the flow to simplify genome analysis.Functional & integrative genomics · 2012
    Review
  4. Article
  5. Flow cytogenetics and plant genome mapping.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2004
    Review
  6. Introduction: chromosomes go with the flow.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2004
    Article
  7. Development of flow cytogenetics and physical genome mapping in chickpea (Cicer arietinum L.).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2002
    Article
  8. Article
  9. Flow karyotyping and sorting of mitotic chromosomes of barley (Hordeum vulgare L.).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 1999
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

J MacasInstitute of Plant Molecular Biology, Branisovská, Czech Republic. macas@entu.cas.cz
G Gualberti
M Nouzová
P Samec
S Lucretti
J Dolezel
Institute of Plant Molecular Biology · CZCzech Academy of Sciences, Institute of Experimental Botany · CZNational Agency for New Technologies, Energy and Sustainable Economic Development · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recombinant DNA libraries were constructed for seven chromosome types isolated from two translocation lines of field bean (Vicia faba L.) with reconstructed karyotypes. The chromosomes were selected so that the set of libraries covers the whole V. faba genome more than once. Individual chromosome types were highly purified by flow sorting, and their DNA was amplified by degenerate oligonucleotide-primed (DOP) polymerase chain reaction (PCR) and cloned into a plasmid vector. The choice of restriction site present in PCR primer and refinement of cloning protocol resulted in high cloning efficiency and allowed generation of libraries consisting of about 10(5) clones from 250 or 1000 sorted chromosomes. The insert size ranged between 50 and 2200 bp and the mean length estimated in individual libraries varied between 310 and 487 bp. Hybridization of cloned fragments with labelled genomic DNA showed that about 60% of inserts represented unique or low-copy sequences. The suitability of the libraries for genome mapping was demonstrated by isolation of clones containing microsatellite motifs.

Indexed as

Gene LibraryPlants, MedicinalChromosome MappingChromosomesCloning, MolecularDNA, PlantDNA PrimersDNA, RecombinantDNA, SatelliteElectrophoresis, Agar GelFabaceaeFlow CytometryGene DosagePolymerase Chain ReactionDNA, PlantDNA PrimersDNA, RecombinantDNA, Satellite

Identifiers

PMID8939365
OpenAlexW1972828268

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.