Evidence map›Paper›PMID 8917561›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1996

Temporal mapping of gene expression levels during the differentiation of individual primary hematopoietic cells.

T Cheng, H Shen, D Giokas, J Gere, D G Tenen, D T Scadden

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 175 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

T ChengMGH Cancer Center, Charlestown 02129, USA.
H Shen
D Giokas
J Gere
D G Tenen
D T Scadden
Massachusetts General Hospital · USHarvard University · US

Funding

MECHANISMS OF HEMATOPOIESIS IN AIDSR01HL044851 · NHLBI · NEW ENGLAND DEACONESS HOSPITAL · PI SCADDEN, DAVID T · 1991 to 2015
$7.7M
FUNCTIONAL ISOLATION OF HUMAN HEMATOPOIETIC STEM CELLSR01DK050234 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI SCADDEN, DAVID T · 1995 to 2012
$3.7M
NHLBI NIH HHS HL 44851NHLBI NIH HHS R01 HL044851NIDDK NIH HHS DK 50234NIDDK NIH HHS R01 DK050234
6 · The paper itself

Abstract

A hierarchical order of gene expression has been proposed to control developmental events in hematopoiesis, but direct demonstration of the temporal relationships between regulatory gene expression and differentiation has been difficult to achieve. We modified a single-cell PCR method to detect 2-fold changes in mRNA copies per cell (dynamic range, 250-250,000 copies/cell) and used it to sequentially quantitate gene expression levels as single primitive (CD34+,CD38-) progenitor cells underwent differentiation to become erythrocytes, granulocytes, or monocyte/macrophages. Markers of differentiation such as CD34 or cytokine receptor mRNAs and transcription factors associated with their regulation were assessed. All transcription factors tested were expressed in multipotent progenitors. During lineage-specific differentiation, however, distinct patterns of expression emerged. SCL, GATA-2, and GATA-1 expression sequentially extinguished during erythroid differentiation. PU.1, AML1B, and C/EBP alpha expression profiles and their relationship to cytokine receptor expression in maturing granulocytes could be distinguished from similar profiles in monocytic cells. These data characterize the dynamics of gene expression accompanying blood cell development and define a signature gene expression pattern for specific stages of hematopoietic differentiation.

Indexed as

Cell DifferentiationGene ExpressionAdultAntigens, CD34Blotting, SouthernBone Marrow CellsCells, CulturedColony-Forming Units AssayCytokinesDNA PrimersGenetic MarkersHematopoietic Stem CellsHumansKineticsMacrophage-1 AntigenPolymerase Chain ReactionAntigens, CD34CytokinesDNA PrimersGenetic MarkersMacrophage-1 AntigenReceptors, ErythropoietinRecombinant Proteins

Identifiers

PMID8917561
PMCPMC24063
OpenAlexW2022969404

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.