Evidence map›Paper›PMID 8903726›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society1996

The application of FISH techniques for physical mapping in the dog (Canis familiaris).

P E Fischer, N G Holmes, H F Dickens, R Thomas, M M Binns, E P Nacheva

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
13.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 45 citations in OpenAlex.

  1. Chromosome identification and assignment of DNA clones in the dog using a red fox and dog comparative map.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2000
    Article
  2. Localization and characterization of nucleotide sequences from the canine Y chromosome.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 1999
    Article
  3. The DAPI banded karyotype of the domestic dog (Canis familiaris) generated using chromosome-specific paint probes.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 1999
    Article
  4. Article
  5. Characterization of an abundant short interspersed nuclear element (SINE) present in Canis familiaris.Mammalian genome : official journal of the International Mammalian Genome Society · 1998
    Article
  6. Towards construction of a canine linkage map: establishment of 16 linkage groups.Mammalian genome : official journal of the International Mammalian Genome Society · 1997
    Article
  7. Report on the progress of standardization of the G-banded canine (Canis familiaris) karyotype. Committee for the Standardized Karyotype of the Dog (Canis familiaris).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 1996
    Article
  8. Chromosome-specific paints from a high-resolution flow karyotype of the dog.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 1996
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

P E FischerAnimal Health Trust, Newmrket, Suffolk, UK.
N G Holmes
H F Dickens
R Thomas
M M Binns
E P Nacheva
Animal Health Trust · GBUniversity of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The abundance of CA/GT repeats in the DNA of the dog (Canis familiaris) has established the importance of polymorphic microsatellites in the development of a low density map of the canine genome. The assignment of linkage groups of markers to chromosomes by physical mapping requires reliable cytogenetic techniques for routine production of metaphase cells. The dog has 78 chromosomes, many of which are smaller and more contracted than those of other mammals. Although the molecular study of inherited disease in dogs has important implications for both improved welfare in dogs and the provision of animal models for human diseases, the small size and large number of chromosomes in the canine genome has discouraged the inclusion of cytogenetic analysis in the planning of relevant research protocols. In this report, Fluorescence In Situ Hybridization (FISH) techniques have been optimized for the physical mapping of probes in C. familiaris. A method to obtain a good yield of early and midmetaphases from short-term peripheral blood cultures and the optimal conditions for hybridization and detection of probes is described. Thirteen microsatellite-containing cosmid probes from a canine genomic library in pWE15, a highly repetitive probe (human ribosomal DNA pHr14E3), and a human X Chromosome (Chr) paint have been mapped. Six microsatellites, two ribosomal sites, and the human paint have been assigned to specific chromosomes.

Indexed as

GenomeAnimalsBase SequenceChromosome BandingChromosome MappingDNA PrimersDNA ProbesDNA, SatelliteDogsFluorescent DyesIndolesIn Situ Hybridization, FluorescenceKaryotypingMicrosatellite RepeatsMolecular Sequence DataDAPIDNA PrimersDNA ProbesDNA, SatelliteFluorescent DyesIndoles

Identifiers

PMID8903726
OpenAlexW1975489737

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.