Evidence map›Paper›PMID 8887677›Full record

ArticleMolecular and cellular biology1996

A structural basis for substrate specificities of protein Ser/Thr kinases: primary sequence preference of casein kinases I and II, NIMA, phosphorylase kinase, calmodulin-dependent kinase II, CDK5, and Erk1.

Z Songyang, K P Lu, Y T Kwon, L H Tsai, O Filhol, C Cochet, D A Brickey, T R Soderling, C Bartleson, D J Graves and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 247 papers.

0numbers the graph read from it
0cells of the map it votes in
247citing papers in PubMed
22.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

247 citing papers in PubMed, 550 citations in OpenAlex.

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  10. Characterization of RAGE and CK2 Expressions in Human Fetal Membranes.International journal of molecular sciences · 2023
    Article
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187 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Z SongyangDivision of Signal Transduction, Beth Israel Hospital, Boston, Massachusetts 02215, USA.
K P Lu
Y T Kwon
L H Tsai
O Filhol
C Cochet
D A Brickey
T R Soderling
C Bartleson
D J Graves
A J DeMaggio
M F Hoekstra
J Blenis
T Hunter
L C Cantley
Harvard University · USEKOS Corporation · USInserm · FRIowa State University · USOregon Health & Science University · USSalk Institute for Biological Studies · US

Funding

PROTEIN KINASE SIGNALING PATHWAYSR01GM056203 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI CANTLEY, LEWIS C. · 1997 to 2012
$4.5M
NIGMS NIH HHS R01 GM056203
6 · The paper itself

Abstract

We have developed a method to study the primary sequence specificities of protein kinases by using an oriented degenerate peptide library. We report here the substrate specificities of eight protein Ser/Thr kinases. All of the kinases studied selected distinct optimal substrates. The identified substrate specificities of these kinases, together with known crystal structures of protein kinase A, CDK2, Erk2, twitchin, and casein kinase I, provide a structural basis for the substrate recognition of protein Ser/Thr kinases. In particular, the specific selection of amino acids at the +1 and -3 positions to the substrate serine/threonine can be rationalized on the basis of sequences of protein kinases. The identification of optimal peptide substrates of CDK5, casein kinases I and II, NIMA, calmodulin-dependent kinases, Erk1, and phosphorylase kinase makes it possible to predict the potential in vivo targets of these kinases.

Indexed as

CDC2-CDC28 KinasesCell Cycle ProteinsMitogen-Activated Protein KinasesAmino Acid SequenceCaenorhabditis elegans ProteinsCalcium-Calmodulin-Dependent Protein KinasesCalcium-Calmodulin-Dependent Protein Kinase Type 2Calmodulin-Binding ProteinsCasein Kinase IICasein KinasesCrystallography, X-RayCyclic AMP-Dependent Protein KinasesCyclin-Dependent Kinase 2Cyclin-Dependent Kinase 5Cyclin-Dependent KinasesDatabases, FactualCaenorhabditis elegans ProteinsCalcium-Calmodulin-Dependent Protein KinasesCalcium-Calmodulin-Dependent Protein Kinase Type 2Calmodulin-Binding ProteinsCasein Kinase IICasein KinasesCDC2-CDC28 KinasesCell Cycle ProteinsCyclic AMP-Dependent Protein KinasesCyclin-Dependent Kinase 2Cyclin-Dependent Kinase 5Cyclin-Dependent KinasesMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 3Mitogen-Activated Protein KinasesMuscle ProteinsNIMA-Related Kinase 1NIMA-related kinase 6NIMA-Related KinasesOligopeptidesPhosphopeptidesPhosphorylase KinaseProtein KinasesProtein Serine-Threonine Kinasesunc-22 protein, C elegansunc-43 protein, C elegans

Identifiers

PMID8887677
PMCPMC231650
OpenAlexW2168259122

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.