Evidence map›Paper›PMID 8880903›Full record

ArticleProtein science : a publication of the Protein Society1996

Electrostatic effects in electron transfer reactions of [2Fe-2S] ferredoxins with inorganic reagents.

M Vidakovic, J P Germanas

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

M VidakovicDepartment of Chemistry, University of Houston, Texas 77204-5641, USA.
J P Germanas
University of Houston · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The kinetics of electron transfer from the reduced [2Fe-2S] ferredoxins from the cyanobacterium Anabaena 7120 and the protozoan Trichomonas vaginalis to select cobalt coordination compounds have been studied in order to gain insight into the mechanism of electron transfer and intrinsic reactivity of [2Fe-2S] active sites. With tripositive cobalt complexes, reactions of both proteins displayed saturation kinetics; values of association constants of 12,900 and 1,400 M-1 and limiting rate constants of 7.6 and 3.5 s-1 were found for oxidation of T. vaginalis and Anabaena ferredoxins, respectively, by Co(NH3)6(3+) at room temperature and I = 0.1 M. An activation enthalpy of 12.1 kcal/mol and activation entropy of -14.3 cal/mol K for oxidation of T. vaginalis ferredoxin by Co(NH3)6(3+) contrasted with corresponding values of 13.4 kcal/mol and -10.5 cal/mol K for the Spirulina platensis protein, which is homologous to Anabaena ferredoxin. The dependence of the reaction rates on ionic strength were measured to probe the importance of electrostatics on the reactivity of the proteins. Analysis of the ionic strength dependence of the oxidation of the proteins by Co(NH3)6(3+) by the "parallel plate" model of Watkins et al. (1994, Protein Sci 3:2104-2114) afforded values for active site charges of -0.7 and -1.1 and limiting rate constants at infinite ionic strength of 25,800 and 76 M-1 S-1 for T. vaginalis and Anabaena ferredoxins, respectively. These results suggest that the [2Fe-2S] center of the protozoal ferredoxin is more accessible and adjacent to a less highly charged, more compact patch of negative charges than the photosynthetic protein.

Indexed as

Electron TransportAmino Acid SequenceAnabaenaAnimalsBinding SitesCobaltElectrochemistryFerredoxinsIndicators and ReagentsKineticsModels, MolecularMolecular Sequence DataOsmolar ConcentrationOxidation-ReductionSpectrophotometryThermodynamicsCobaltFerredoxinsIndicators and Reagents

Identifiers

PMID8880903
PMCPMC2143536
OpenAlexW2133569497

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.