Evidence map›Paper›PMID 8876167›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1996

CDP/cut is the DNA-binding subunit of histone gene transcription factor HiNF-D: a mechanism for gene regulation at the G1/S phase cell cycle transition point independent of transcription factor E2F.

A J van Wijnen, M F van Gurp, M C de Ridder, C Tufarelli, T J Last, M Birnbaum, P S Vaughan, A Giordano, W Krek, E J Neufeld and 2 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 118 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Review
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  8. Review
  9. Article
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  11. The abbreviated pluripotent cell cycle.Journal of cellular physiology · 2013
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. The histone gene activator HINFP is a nonredundant cyclin E/CDK2 effector during early embryonic cell cycles.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  18. Regulation of cell proliferation and differentiation in the kidney.Frontiers in bioscience (Landmark edition) · 2009
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

A J van WijnenDepartment of Cell Biology, University of Massachusetts Medical School, Worcester 01655, USA.
M F van Gurp
M C de Ridder
C Tufarelli
T J Last
M Birnbaum
P S Vaughan
A Giordano
W Krek
E J Neufeld
J L Stein
G S Stein
Novartis (Switzerland) · CH

Funding

CONTROL OF OSTEOBLAST PROLIFERATION AND DIFFERENTIATIONR01AR039588 · NIAMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LIAN, JANE B., STEIN, GARY S. · 1990 to 2019
$8.0M
IDENTIFICATION OF HUMAN HISTONE GENE REGULATORY SEQUENCER01GM032010 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI STEIN, GARY S. · 1985 to 2006
$3.4M
pRb2/p130: from the mechanisms to gene therapyR01CA060999 · NCI · THOMAS JEFFERSON UNIVERSITY · PI GIORDANO, ANTONIO · 1994 to 2008
$2.6M
NCI NIH HHS CA 60999NIAMS NIH HHS AR 39588NIGMS NIH HHS GM 32010
6 · The paper itself

Abstract

Transcription of the genes for the human histone proteins H4, H3, H2A, H2B, and H1 is activated at the G1/S phase transition of the cell cycle. We have previously shown that the promoter complex HiNF-D, which interacts with cell cycle control elements in multiple histone genes, contains the key cell cycle factors cyclin A, CDC2, and a retinoblastoma (pRB) protein-related protein. However, an intrinsic DNA-binding subunit for HiNF-D was not identified. Many genes that are up-regulated at the G1/S phase boundary are controlled by E2F, a transcription factor that associates with cyclin-, cyclin-dependent kinase-, and pRB-related proteins. Using gel-shift immunoassays, DNase I protection, and oligonucleotide competition analyses, we show that the homeodomain protein CDP/cut, not E2F, is the DNA-binding subunit of the HiNF-D complex. The HiNF-D (CDP/cut) complex with the H4 promoter is immunoreactive with antibodies against CDP/cut and pRB but not p107, whereas the CDP/cut complex with a nonhistone promoter (gp91-phox) reacts only with CDP and p107 antibodies. Thus, CDP/cut complexes at different gene promoters can associate with distinct pRB-related proteins. Transient coexpression assays show that CDP/cut modulates H4 promoter activity via the HiNF-D-binding site. Hence, DNA replication-dependent histone H4 genes are regulated by an E2F-independent mechanism involving a complex of CDP/cut with cyclin A/CDC2/ RB-related proteins.

Indexed as

Carrier ProteinsCell CycleCell Cycle ProteinsPromoter Regions, GeneticBase SequenceBinding SitesCell NucleusConsensus SequenceDNA-Binding ProteinsDNA FootprintingDNA ReplicationE2F Transcription FactorsG1 PhaseHeLa CellsHistonesHomeodomain ProteinsCarrier ProteinsCell Cycle ProteinsCUX1 protein, humanDNA-Binding ProteinsE2F Transcription FactorsHINF-D protein, humanHistonesHomeodomain ProteinsNuclear ProteinsRecombinant Fusion ProteinsRepressor ProteinsRetinoblastoma-Binding Protein 1Transcription Factor DP1Transcription Factors

Identifiers

PMID8876167
PMCPMC38089
OpenAlexW2086365424

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.