Evidence map›Paper›PMID 8855285›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1996

Mammalian orthologues of a yeast regulator of nonsense transcript stability.

H A Perlick, S M Medghalchi, F A Spencer, R J Kendzior, H C Dietz

Abstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Physiological and pathophysiological role of nonsense-mediated mRNA decay.Pflugers Archiv : European journal of physiology · 2016
    Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. NMD: a multifaceted response to premature translational termination.Nature reviews. Molecular cell biology · 2012
    Review
  16. Article
  17. Article
  18. Perturbation of thymocyte development in nonsense-mediated decay (NMD)-deficient mice.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

H A PerlickDepartment of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
S M Medghalchi
F A Spencer
R J Kendzior
H C Dietz

Funding

CROSS-REFERENCING YEAST GENETICS AND MAMMALIAN GENOMESR01HG000971 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI SPENCER, FORREST A. · 1994 to 1999
–
NHGRI NIH HHS HG00971NIAMS NIH HHS AR/HL41135
6 · The paper itself

Abstract

All eukaryotes that have been studied to date possess the ability to detect and degrade transcripts that contain a premature signal for the termination of translation. This process of nonsense-mediated RNA decay has been most comprehensively studied in the yeast Saccharomyces cerevisiae where at least three trans-acting factors (Upf1p through Upf3P) are required. We have cloned cDNAs encoding human and murine homologues of Upf1p, termed rent1 (regulator of nonsense transcripts). Rent1 is the first identified mammalian protein that contains all of the putative functional elements in Upf1p including zinc finger-like and NTPase domains, as well as all motifs common to members of helicase superfamily I. Moreover, expression of a chimeric protein, N and C termini of Upf1p, complements the Upf1p-deficient phenotype in yeast. Thus, despite apparent differences between yeast and mammalian nonsense-mediated RNA decay, these data suggest that the two pathways use functionally related machinery.

Indexed as

RNA HelicasesAdenosine TriphosphatasesAmino Acid SequenceAnimalsChromosome MappingCloning, MolecularCodon, NonsenseConsensus SequenceDNA HelicasesFungal ProteinsGene Expression Regulation, FungalGenetic Complementation TestHumansMiceMolecular Sequence DataRNA, MessengerAdenosine TriphosphatasesCodon, NonsenseDNA HelicasesFungal ProteinsNAM7 protein, S cerevisiaeRent1 protein, mouseRNA HelicasesRNA, MessengerSaccharomyces cerevisiae ProteinsTrans-ActivatorsUPF1 protein, human

Identifiers

PMID8855285
PMCPMC38260

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.