Evidence map›Paper›PMID 8855249›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1996

Base excision of oxidative purine and pyrimidine DNA damage in Saccharomyces cerevisiae by a DNA glycosylase with sequence similarity to endonuclease III from Escherichia coli.

L Eide, M Bjørås, M Pirovano, I Alseth, K G Berdal, E Seeberg

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed.

  1. International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

L EideDepartment of Molecular Biology, University of Oslo, National Hospital, Norway.
M Bjørås
M Pirovano
I Alseth
K G Berdal
E Seeberg

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One gene locus on chromosome I in Saccharomyces cerevisiae encodes a protein (YAB5_YEAST; accession no. P31378) with local sequence similarity to the DNA repair glycosylase endonuclease III from Escherichia coli. We have analyzed the function of this gene, now assigned NTG1 (endonuclease three-like glycosylase 1), by cloning, mutant analysis, and gene expression in E. coli. Targeted gene disruption of NTG1 produces a mutant that is sensitive to H2O2 and menadione, indicating that NTG1 is required for repair of oxidative DNA damage in vivo. Northern blot analysis and expression studies of a NTG1-lacZ gene fusion showed that NTG1 is induced by cell exposure to different DNA damaging agents, particularly menadione, and hence belongs to the DNA damage-inducible regulon in S. cerevisiae. When expressed in E. coli, the NTG1 gene product cleaves plasmid DNA damaged by osmium tetroxide, thus, indicating specificity for thymine glycols in DNA similarly as is the case for EndoIII. However, NTG1 also releases formamidopyrimidines from DNA with high efficiency and, hence, represents a glycosylase with a novel range of substrate recognition. Sequences similar to NTG1 from other eukaryotes, including Caenorhabditis elegans, Schizosaccharomyces pombe, and mammals, have recently been entered in the GenBank suggesting the universal presence of NTG1-like genes in higher organisms. S. cerevisiae NTG1 does not have the [4Fe-4S] cluster DNA binding domain characteristic of the other members of this family.

Indexed as

DNA DamageDNA RepairEscherichia coli ProteinsSaccharomyces cerevisiae ProteinsAmino Acid SequenceDeoxyribonuclease (Pyrimidine Dimer)DNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA, FungalDNA GlycosylasesEndodeoxyribonucleasesGenes, FungalHelix-Loop-Helix MotifsMolecular Sequence DataN-Glycosyl HydrolasesSaccharomyces cerevisiaeDeoxyribonuclease (Pyrimidine Dimer)DNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA, FungalDNA GlycosylasesEndodeoxyribonucleasesEscherichia coli ProteinsN-Glycosyl HydrolasesNTG1 protein, S cerevisiaeNTH protein, E coliSaccharomyces cerevisiae Proteins

Identifiers

PMID8855249
PMCPMC38224

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.