Evidence map›Paper›PMID 8804398›Full record

ArticleMolecular & general genetics : MGG1996

Mutational analysis of the beta-subunit of yeast geranylgeranyl transferase I.

Y Ohya, B E Caplin, H Qadota, M F Tibbetts, Y Anraku, J R Pringle, M S Marshall

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In one paragraph

Article in Molecular & general genetics : MGG, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Cdc42: An essential Rho-type GTPase controlling eukaryotic cell polarity.Microbiology and molecular biology reviews : MMBR · 1999
    Review
  4. Substrate specificity determinants in the farnesyltransferase beta-subunit.Proceedings of the National Academy of Sciences of the United States of America · 1997
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Y OhyaDepartment of Biological Sciences, Graduate School of Science, University of Tokyo, Japan.
B E Caplin
H Qadota
M F Tibbetts
Y Anraku
J R Pringle
M S Marshall
The University of Tokyo · JPIndiana University School of MedicineUniversity of Michigan–Ann Arbor · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The gene CAL1 (also known as CDC43) of Saccharomyces cerevisiae encodes the beta subunit of geranylgeranyl transferase I (GGTase I), which modifies several small GTPases. Biochemical analyses of the mutant enzymes encoded by cal1-1, and cdc43-2 to cdc43-7, expressed in bacteria, have shown that all of the mutant enzymes possess reduced activity, and that none shows temperature-sensitive enzymatic activities. Nonetheless, all of the cal1/cdc43 mutants show temperature-sensitive growth phenotypes. Increase in soluble pools of the small GTPases was observed in the yeast mutant cells at the restrictive temperature in vivo, suggesting that the yeast prenylation pathway itself is temperature sensitive. The cal1-1 mutation, located most proximal to the C-terminus of the protein, differs from the other cdc43 mutations in several respects. An increase in soluble Rho1p was observed in the cal1-1 strain grown at the restrictive temperature. The temperature-sensitive phenotype of cal1-1 is most efficiently suppressed by overproduction of Rho1p. Overproduction of the other essential target, Cdc42p, in contrast, is deleterious in cal1-1 cells, but not in other cdc43 mutants or the wild-type strains. The cdc43-5 mutant cells accumulate Cdc42p in soluble pools and cdc43-5 is suppressed by overproduction of Cdc42p. Thus, several phenotypic differences are observed among the cal1/cdc43 mutations, possibly due to alterations in substrate specificity caused by the mutations.

Indexed as

Alkyl and Aryl Transferasesrho GTP-Binding ProteinsSaccharomyces cerevisiae ProteinsAmino Acid SequenceBase Sequencecdc42 GTP-Binding Protein, Saccharomyces cerevisiaeCell Cycle ProteinsDNA Mutational AnalysisEscherichia coliGene ExpressionGenes, FungalGTP-Binding ProteinsGTP PhosphohydrolasesMolecular Sequence DataMutationPhenotypeAlkyl and Aryl Transferasescdc42 GTP-Binding Protein, Saccharomyces cerevisiaeCDC43 protein, S cerevisiaeCell Cycle Proteinsgeranylgeranyltransferase type-IGTP-Binding ProteinsGTP PhosphohydrolasesRecombinant ProteinsRHO1 protein, S cerevisiaerho GTP-Binding ProteinsSaccharomyces cerevisiae ProteinsTransferases

Identifiers

PMID8804398
OpenAlexW2145512303

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.