Evidence map›Paper›PMID 8799124›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1996

Degradation of CYC1 mRNA in the yeast Saccharomyces cerevisiae does not require translation.

D F Yun, F Sherman

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

D F YunDepartment of Biochemistry, University of Rochester, School of Medicine and Dentistry, NY 14642, USA.
F Sherman
University of Rochester · US

Funding

Regulation and Gene Expression of Yeast Cytochrome cR01GM012702 · NIGMS · UNIVERSITY OF ROCHESTER · PI SHERMAN, FRED · 1985 to 2010
$4.3M
NIGMS NIH HHS R01 GM12702
6 · The paper itself

Abstract

Several studies have indicated that degradation of certain mRNAs is tightly coupled to their translation, whereas, in contrast, other observations suggested that translation can be inhibited without changing the stability of the mRNA. We have addressed this question with the use of altered CYC1 alleles, which encode iso-1-cytochrome c in the yeast Saccharomyces cerevisiae. The cyc1-1249 mRNA, which lacks all in-frame and out-of-frame AUG triplets, was as stable as the normal mRNA. This finding established that translation is not required for the degradation of CYC1 mRNAs. Furthermore, poly(G)18 tracks were introduced within the CYC1 mRNA translated regions to block exonuclease degradation. The recovery of 3' fragments revealed that the translatable and the AUG-deficient mRNAs are both degraded 5'-->3'. Also, the increased stability of CYC1 mRNAs in xrn1-delta strains lacking Xrn1p, the major 5'-->3' exonuclease, established that the normal and AUG-deficient mRNAs are degraded by the same pathway. In addition, deadenylylation, which activates the action of Xrn1p, occurred at equivalent rates in both normal and AUG-deficient mRNAs. We conclude that translation is not required for the normal degradation of CYC1 mRNAs, and that translatable and untranslated mRNAs are degraded by the same pathway.

Indexed as

Cytochromes cExoribonucleasesProtein BiosynthesisSaccharomyces cerevisiae ProteinsBase SequenceCodon, InitiatorCytochrome c GroupDeoxyribonucleasesFungal ProteinsHalf-LifeMolecular Sequence DataMutagenesisPoly APoly GRNA, FungalRNA, MessengerCodon, InitiatorCYC1 protein, S cerevisiaeCytochrome c GroupCytochromes cDeoxyribonucleasesExoribonucleasesFungal ProteinsPoly APoly GRNA, FungalRNA, MessengerSaccharomyces cerevisiae ProteinsXRN1 protein, S cerevisiae

Identifiers

PMID8799124
PMCPMC38565
OpenAlexW2092122205

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.