Evidence map›Paper›PMID 8794872›Full record

ArticleThe Journal of cell biology1996

A potent far-upstream enhancer in the mouse pro alpha 2(I) collagen gene regulates expression of reporter genes in transgenic mice.

G Bou-Gharios, L A Garrett, J Rossert, K Niederreither, H Eberspaecher, C Smith, C Black, B Crombrugghe

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 147 citations in OpenAlex.

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  11. Characterization of Krt19Journal of cellular physiology · 2020
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  20. Animal models of systemic sclerosis: their utility and limitations.Open access rheumatology : research and reviews · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

G Bou-GhariosDepartment of Molecular Genetics, University of Texas M.D. Anderson Cancer Center, Houston 77030, USA.
L A Garrett
J Rossert
K Niederreither
H Eberspaecher
C Smith
C Black
B Crombrugghe
The University of Texas MD Anderson Cancer Center · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
CONTROL OF TYPE I &III COLLAGEN GENES IN LUNG FIBROSISR01HL041264 · NHLBI · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI DE CROMBRUGGHE, BENOIT · 1988 to 2001
$773k
NCI NIH HHS CA-16672NHLBI NIH HHS HL41264
6 · The paper itself

Abstract

We have identified three DNase I-hypersensitive sites in chromatin between 15 and 17 kb upstream of the mouse pro alpha 2 (I) collagen gene. These sites were detected in cells that produce type I collagen but not in cells that do not express these genes. A construction containing the sequences from -17 kb to +54 bp of the mouse pro alpha 2 (I) collagen gene, cloned upstream of either the Escherichia coli beta-galactosidase or the firefly luciferase reporter gene, showed strong enhancer activity in transgenic mice when compared with the levels seen previously in animals harboring shorter promoter fragments. Especially high levels of expression of the reporter gene were seen in dermis, fascia, and the fibrous layers of many internal organs. High levels of expression could also be detected in some osteoblastic cells. When various fragments of the 5' flanking sequences were cloned upstream of the 350-bp proximal pro alpha 2(I) collagen promoter linked to the lacZ gene, the cis-acting elements responsible for enhancement were localized in the region between -13.5 and -19.5 kb, the same region that contains the three DNase I-hypersensitive sites. Moreover, the DNA segment from -13.5 to -19.5 kb was also able to drive the cell-specific expression of a 220-bp mouse pro alpha 1(I) collagen promoter, which is silent in transgenic mice. Hence, our data suggest that a far-upstream enhancer element plays a role in regulating high levels of expression of the mouse pro alpha 2(I) collagen gene.

Indexed as

Enhancer Elements, GeneticGene Expression Regulation3T3 CellsAnimalsAnimals, Newbornbeta-GalactosidaseBinding SitesCell LineDeoxyribonuclease IEmbryo, MammalianGenes, ReporterLac OperonLuciferasesMiceMice, TransgenicProcollagenbeta-GalactosidaseDeoxyribonuclease ILuciferasesProcollagen

Identifiers

PMID8794872
PMCPMC2120987
OpenAlexW1971585190

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.