ArticleGenetics1996
Adjacent sequences influence DNA repair accompanying transposon excision in maize.
Article in Genetics, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
34 citing papers in PubMed, 83 citations in OpenAlex.
- Genomic and evolutionary analysis reveals dynamic variations of MKK3 gene, a key regulator for seed dormancy in barley.The plant genome · 2026Article
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- Nonhomologous End-Joining with Minimal Sequence Loss Is Promoted by the Mre11-Rad50-Nbs1-Ctp1 Complex inGenetics · 2017Article
- ARGOS8 variants generated by CRISPR-Cas9 improve maize grain yield under field drought stress conditions.Plant biotechnology journal · 2017Article
- Efficient generation of marker-free transgenic rice plants using an improved transposon-mediated transgene reintegration strategy.Plant physiology · 2015Article
- Precise repair of mPing excision sites is facilitated by target site duplication derived microhomology.Mobile DNA · 2015Article
- Exploiting the extraordinary genetic polymorphism of ciona for developmental genetics with whole genome sequencing.Genetics · 2014Article
- The spectrum and frequency of self-inflicted and host gene mutations produced by the transposon Ac in maize.The Plant cell · 2012Article
- Transposition behavior of nonautonomous a hAT superfamily transposon nDart in rice (Oryza sativa L.).Molecular genetics and genomics : MGG · 2011Article
- Oryza sativa cytochrome P450 family member OsCYP96B4 reduces plant height in a transcript dosage dependent manner.PloS one · 2011Article
- Genome-wide distribution of transposed Dissociation elements in maize.The Plant cell · 2010Article
- Transposon excision from an atypical site: a mechanism of evolution of novel transposable elements.PloS one · 2007Article
- Article
- Generating novel allelic variation through Activator insertional mutagenesis in maize.Genetics · 2007Article
- High-frequency Ds remobilization over multiple generations in barley facilitates gene tagging in large genome cereals.Plant molecular biology · 2006Article
- Article
- RYS1, a foldback transposon, is activated by tissue culture and shows preferential insertion points into the rye genome.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2005Article
- Jittery, a Mutator distant relative with a paradoxical mobile behavior: excision without reinsertion.The Plant cell · 2004Article
- Instability of the insertional mutation in CftrTgH(neoim)Hgu cystic fibrosis mouse model.BMC genetics · 2004Article
- Microhomology-dependent end joining and repair of transposon-induced DNA hairpins by host factors in Saccharomyces cerevisiae.Molecular and cellular biology · 2004Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Mobile elements transposing via DNA intermediates often leave small rearrangements, or "transposon footprints," at sites where they excise. Each excision event leaves its own footprint and, at any given site, these vary in size and sequence. Footprint formation involves DNA repair of sequences flanking the element. We have analyzed the footprints formed by a 2-kb Ds element excising from six different sites in exons of the maize waxy (Wx) gene. We find that groups of footprints left at individual sites are surprisingly nonrandom; different excision products predominate consistently at each site. Less frequent footprints left by each insertion appear related to the predominant type. The data suggest that flanking sequences affect the DNA repair processes associated with element excision. Two models have been proposed to explain footprint formation, one featuring a 5' exonuclease and the other featuring hairpin loop formation and an endonuclease. Our data have interesting implications for both these models. Evidence is also presented to support the presence of a separate excision mechanism that can remove Ac/Ds elements without leaving any footprint and that operates in parallel with the footprint-forming mechanism.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.