Evidence map›Paper›PMID 8755928›Full record

ArticleAmerican journal of human genetics1996

Large domains of apparent delayed replication timing associated with triplet repeat expansion at FRAXA and FRAXE.

P S Subramanian, D L Nelson, A C Chinault

Open access · greenAbstract read
In one paragraph

Article in American journal of human genetics, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 70 citations in OpenAlex.

  1. Emerging drivers of DNA repeat expansions.Biochemical Society transactions · 2025
    Review
  2. Article
  3. Article
  4. Review
  5. Alternative DNA StructuresMicrobiology and molecular biology reviews : MMBR · 2021
    Review
  6. Article
  7. Of Men and Mice: Modeling the Fragile X Syndrome.Frontiers in molecular neuroscience · 2018
    Article
  8. Fragility Extraordinaire: Unsolved Mysteries of Chromosome Fragile Sites.Advances in experimental medicine and biology · 2017
    Review
  9. Article
  10. Article
  11. Article
  12. Replication fork stalling at natural impediments.Microbiology and molecular biology reviews : MMBR · 2007
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Analysis of replication timing at the FRA10B and FRA16B fragile site loci.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2000
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

P S SubramanianDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
D L Nelson
A C Chinault
Baylor College of Medicine · US

Funding

MOLECULAR GENETICS EMPHASIZING VISION RESEARCHT32EY007102 · NEI · BAYLOR COLLEGE OF MEDICINE · PI MARDON, GRAEME · 1988 to 2019
$3.8M
X-CHROMOSOME REPLICATIONR01GM037187 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI CHINAULT, ALAN CRAIG · 1987 to 1993
–
REPLICATION TIMING DOMAINS IN HUMAN CHROMOSOMESR01GM053033 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI CHINAULT, ALAN CRAIG · 1995 to 1998
–
NEI NIH HHS EY07102-05S3NIGMS NIH HHS GM37187NIGMS NIH HHS GM53033
6 · The paper itself

Abstract

Trinucleotide repeat expansions have been implicated in the causation of a number of neurodegenerative disorders. In the case of fragile X syndrome, full expansion of the FMR1 repeat element (CGG)n has also been correlated with replication timing delay of the locus and proximal flanking sequences in male lymphoblasts. To define more extensively this altered region of DNA replication, as well as to extend these studies to female cells containing premutant and mutant alleles, study of the replication timing properties of a >2-Mb zone in the FRAXA region (Xq27.3-q28) was undertaken by using a FISH technique. In this assay, relative times of replication of specific loci are inferred from the ratios of singlet and doublet hybridization signals in interphase nuclei. In all individuals with a full expansion of the trinucleotide repeat, a large (1-1.2-Mb) region of delayed timing was observed; the apparent timing of the earlier-replicating allele in female cells in this region was intermediate between normal and affected alleles in males, which is in accordance with expectations of a mixed population of cells resulting from random X inactivation. In addition, expansion of the nearby FRAXE locus also was found to correlate with replication timing delay, although the extent of the altered region was somewhat less. Trinucleotide repeat expansion thus may be acting in the Xq27.3-q28 region to alter long-range chromatin structure that could influence transcription of gene sequences within the affected domain.

Indexed as

DNA ReplicationRNA-Binding ProteinsTrinucleotide RepeatsCells, CulturedErythroid Precursor CellsFemaleFragile X Messenger Ribonucleoprotein 1Fragile X SyndromeHumansHypoxanthine PhosphoribosyltransferaseIn Situ Hybridization, FluorescenceLymphocytesMaleNerve Tissue ProteinsTime FactorsX ChromosomeFMR1 protein, humanFragile X Messenger Ribonucleoprotein 1Hypoxanthine PhosphoribosyltransferaseNerve Tissue ProteinsRNA-Binding Proteins

Identifiers

PMID8755928
PMCPMC1914744
OpenAlexW2992013007

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.