Evidence map›Paper›PMID 8755569›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1996

Gene-targeted deletion and replacement mutations of the T-cell receptor beta-chain enhancer: the role of enhancer elements in controlling V(D)J recombination accessibility.

J C Bories, J Demengeot, L Davidson, F W Alt

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Inefficient V(D)J recombination underlies monogenic T cell receptor β expression.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  9. Two Successive Inversional Vβ Rearrangements on a SingleJournal of immunology (Baltimore, Md. : 1950) · 2020
    Article
  10. Misregulation of theFrontiers in immunology · 2018
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Long-Range Regulation of V(D)J Recombination.Advances in immunology · 2015
    Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

J C BoriesUnité 93, Institut National de la Santé et de la Recherche Médicale,Hôpital Saint-Louis, Paris, France.
J Demengeot
L Davidson
F W Alt

Funding

PHS HHS A.I.20047
6 · The paper itself

Abstract

To assess the role of transcriptional enhancers in regulating accessibility of the T-cell receptor beta-chain (TCRbeta) locus, we generated embryonic stem cell lines in which a single allelic copy of the endogenous TCRbeta enhancer (Ebeta) was either deleted or replaced with the immunoglobulin heavy-chain intronic enhancer. We assayed the effects of these mutations on activation of the TCRbeta locus in normal T- and B-lineage cells by RAG-2 (recombination-activating gene 2)-deficient blastocyst complementation. We found that Ebeta is required for rearrangement and germ-line transcription of the TCRbeta locus in T-lineage cells. In the absence of Ebeta, the heavy-chain intronic enhancer partially supported joining region beta-chain rearrangement in T- but not in B-lineage cells. However, ability of the heavy-chain intronic enhancer to induce rearrangements was blocked by linkage to an expressed neomycin-resistance gene (neo(r)). These results demonstrate a critical role for Ebeta in promoting accessibility of the TCRbeta locus and suggest that additional negative elements may cooperate to further modulate this process.

Indexed as

DNA-Binding ProteinsEnhancer Elements, GeneticGene DeletionGene Rearrangement, beta-Chain T-Cell Antigen ReceptorAllelesAnimalsBase SequenceBlastocystB-LymphocytesCells, CulturedChimeraDNA NucleotidyltransferasesDNA PrimersGenetic Complementation TestGenomic LibraryImmunoglobulin Heavy ChainsDNA-Binding ProteinsDNA NucleotidyltransferasesDNA PrimersImmunoglobulin Heavy ChainsImmunoglobulin Joining RegionImmunoglobulin Variable RegionProteinsRag2 protein, mouseReceptors, Antigen, T-Cell, alpha-betaVDJ RecombinasesV(D)J recombination activating protein 2

Identifiers

PMID8755569
PMCPMC38841

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.