Evidence map›Paper›PMID 8752327›Full record

ArticleJournal of bacteriology1996

Identification of sigma S-regulated genes in Salmonella typhimurium: complementary regulatory interactions between sigma S and cyclic AMP receptor protein.

F C Fang, C Y Chen, D G Guiney, Y Xu

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

F C FangDepartment of Medicine, University of Colorado Health Sciences Center, Denver 80262, USA.
C Y Chen
D G Guiney
Y Xu
University of Colorado Health · US

Funding

PLASMID-MEDIATED VIRULENCE IN SALMONELLAR01AI032178 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GUINEY, DONALD G. · 1993 to 2008
$3.1M
Plasmid-Mediated Virulence in SalmonellaR56AI032178 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GUINEY, DONALD G. · 2010 to 2010
$386k
SALMONELLA/HUMAN IMMUNODEFICIENCY VIRUS VACCINE VECTORR29AI032463 · NIAID · UNIVERSITY OF COLORADO DENVER · PI FANG, FERRIC C · 1992 to 1996
–
NIAID NIH HHS AI32178NIAID NIH HHS AI32463
6 · The paper itself

Abstract

sigma S (RpoS)-regulated lacZ transcriptional fusions in Salmonella typhimurium were identified from a MudJ transposon library by placing the rpoS gene under the control of the araBAD promoter and detecting lacZ expression in the presence or absence of arabinose supplementation. Western blot (immunoblot) analysis of bacteria carrying PBAD::rpoS demonstrated arabinose-dependent rpoS expression during all phases of growth. sigma S-dependent gene expression of individual gene fusions was confirmed by P22-mediated transduction of the MudJ insertions into wild-type or rpoS backgrounds. Analysis of six insertions revealed the known sigma S-regulated gene otsA, as well as five novel loci. Each of these genes is maximally expressed in stationary phase, and all but one show evidence of cyclic AMP receptor protein-dependent repression during logarithmic growth which is relieved in stationary phase. For these genes, as well as for the sigma S-regulated spvB plasmid virulence gene, a combination of rpoS overexpression and crp inactivation can result in high-level expression during logarithmic growth. The approach used to identify sigma S-regulated genes in this study provides a general method for the identification of genes controlled by trans-acting regulatory factors.

Indexed as

Gene Expression Regulation, BacterialAmino Acid SequenceAnimalsArabinoseBacterial ProteinsBlotting, WesternCloning, MolecularFemaleGenetic Complementation TestIsopropyl ThiogalactosideLac OperonMiceMice, Inbred BALB CMolecular Sequence DataOsmolar ConcentrationReceptors, Cyclic AMPArabinoseBacterial ProteinsIsopropyl ThiogalactosideReceptors, Cyclic AMPSigma Factorsigma factor KatF protein, Bacteria

Identifiers

PMID8752327
PMCPMC178306
OpenAlexW2135797172

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.