Evidence map›Paper›PMID 8692702›Full record

ArticleNucleic acids research1996

Comparative and functional analysis of the AP2 promoter indicates that conserved octamer and initiator elements are critical for activity.

P C Creaser, D A D'Argenio, T Williams

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

P C CreaserDepartment of Biology, Yale University, New Haven, CT 06520-8103, USA.
D A D'Argenio
T Williams
Yale University · US

Funding

TRANSCRIPTION FACTOR REGULATION DURING DEVELOPMENTR01GM046770 · NIGMS · YALE UNIVERSITY · PI WILLIAMS, TREVOR J · 1992 to 1996
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NIGMS NIH HHS GM46770
6 · The paper itself

Abstract

AP-2 is a developmentally-regulated transcription factor expressed in ectodermal cell lineages. The AP-2 protein is essential for neural tube, craniofacial and body wall morphogenesis and has been implicated in oncogenesis. Here we report the isolation of the AP-2 promoter from human, mouse and chicken. The initiation sites for the human gene have been mapped in a variety of cell lines, including several derived from breast tumours. Initiation occurs just upstream of an IR3-like repetitive element, present in the human and mouse genes, but absent in chicken. The cis-acting elements responsible for promoter activity in human HeLa cells have been mapped both in vivo and in vitro. The proximal promoter contains binding sites for transcription factors AP-2, NF-1 and octamer proteins, but lacks a TATA box motif. Functional analysis demonstrates that the octamer binding site is the critical component of basal promoter activity. In addition, the promoter relies on an initiator element for efficient start site utilization. There is an excellent correlation between the requirement for the initiator and octamer elements in transcription assays and the conservation of these cis-acting sequences between chicken, mouse and human.

Indexed as

Gene Expression RegulationPromoter Regions, GeneticTranscription, GeneticAnimalsBase SequenceBinding SitesCell-Free SystemConsensus SequenceConserved SequenceDNA-Binding ProteinsDNA FootprintingHumansMiceMolecular Sequence DataNeurofibromin 1Protein BindingDNA-Binding ProteinsNeurofibromin 1ProteinsTranscription Factor AP-2Transcription Factors

Identifiers

PMID8692702
PMCPMC145978
OpenAlexW2105872656

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.