Evidence map›Paper›PMID 8676438›Full record

ArticleJournal of virology1996

Genetic analysis of the activation domain of bovine papillomavirus protein E2: its role in transcription and replication.

M K Ferguson, M R Botchan

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 66 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

M K FergusonDepartment of Molecular and Cell Biology, Division of Biochemistry and Molecular Biology, University of California, Berkeley, California 94720, USA.
M R Botchan
University of California, Berkeley · US

Funding

TRANSFORMATION OF CELLS BY SV-40 VIRUSR01CA030490 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI BERGER, JAMES M., BOTCHAN, MICHAEL R. · 1985 to 2020
$5.1M
REGULATORY INTERACTIONS BETWEEN TUMOR VIRUSES AND CELLSR37CA030490 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI BOTCHAN, MICHAEL R. · 1988 to 2014
$4.8M
Bovine Papiloma Virus - Model SystemsR01CA042414 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI BOTCHAN, MICHAEL R. · 1986 to 2008
$3.1M
NCI NIH HHS CA30490NCI NIH HHS CA42414
6 · The paper itself

Abstract

The bovine papillomavirus protein E2 serves dual functions in viral transcription and in the initiation of viral replication. As a transcription factor, E2 can cooperatively interact with cellular proteins such as SP1 and stimulate transcription of distal promoters. In replication, E2 and the helicase El are the only viral proteins required for accurate replication of templates containing the viral origin. The amino terminus of E2 is a functionally separable domain critical for activation of both replication and transcription; its primary sequence is conserved between many strains of papillomavirus. We targeted conserved residues spanning the activation domain and constructed a series of 30 amino acid substitution mutants. These mutant E2 genes were analyzed for the ability to activate DNA replication and gene expression in cells. The majority of the substitutions affected the ability of E2 to support both viral replication and transcriptional activation, revealing substantial overlap of the functional determinants for these two processes. Replication and transcription activities are genetically separable, however, as mutations at amino acids 73 and 74 retained replication function but failed to activate transcription. Additionally, a mutation at position 39 substantially reduced replication activity but left transcriptional activation intact. Interestingly, over two-thirds of the mutations analyzed reduced function and protein accumulation, many in a temperature-dependent manner. The correspondence between the replication and transcription phenotypes of mutations spanning the activation domain may indicate that the entire region is folded into a single domain required for both functions.

Indexed as

Transcription, GeneticVirus ReplicationAmino Acid SequenceAnimalsBinding SitesBovine papillomavirus 1CattleCell LineChlorocebus aethiopsDNA-Binding ProteinsGenetic VectorsMolecular Sequence DataMutagenesisPhenotypeStructure-Activity RelationshipTemperatureDNA-Binding ProteinsE2 protein, Bovine papillomavirusViral Proteins

Identifiers

PMID8676438
PMCPMC190348
OpenAlexW1565615671

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.