Evidence map›Paper›PMID 8643580›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1996

Insights into antibody catalysis: structure of an oxygenation catalyst at 1.9-angstrom resolution.

L C Hsieh-Wilson, P G Schultz, R C Stevens

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. A structural basis for the activity of retro-Diels-Alder catalytic antibodies: evidence for a catalytic aromatic residue.Proceedings of the National Academy of Sciences of the United States of America · 2002
    Article
  4. Structural evidence for a programmed general base in the active site of a catalytic antibody.Proceedings of the National Academy of Sciences of the United States of America · 2000
    Article
  5. Cyclic peptide formation catalyzed by an antibody ligase.Proceedings of the National Academy of Sciences of the United States of America · 2000
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

L C Hsieh-WilsonDepartment of Chemistry, University of California, Berkeley, 94720, USA.
P G Schultz
R C Stevens
University of California, Berkeley · USHoward Hughes Medical Institute · US

Funding

SYNTHESIS OF CATALYTIC ANTIBODIESR01AI024695 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI SCHULTZ, PETER G · 1987 to 1996
–
NIAID NIH HHS R01 AI 24695
6 · The paper itself

Abstract

The x-ray crystal structures of the sulfide oxidase antibody 28B4 and of antibody 28B4 complexed with hapten have been solved at 2.2-angstrom and 1.9-angstrom resolution, respectively. To our knowledge, these structures are the highest resolution catalytic antibody structures to date and provide insight into the molecular mechanism of this antibody-catalyzed monooxygenation reaction. Specifically, the data suggest that entropic restriction plays a fundamental role in catalysis through the precise alignment of the thioether substrate and oxidant. The antibody active site also stabilizes developing charge on both sulfur and periodate in the transition state via cation-pi and electrostatic interactions, respectively. In addition to demonstrating that the active site of antibody 28B4 does indeed reflect the mechanistic information programmed in the aminophosphonic acid hapten, these high-resolution structures provide a basis for enhancing turnover rates through mutagenesis and improved hapten design.

Indexed as

Protein Structure, SecondaryAmino Acid SequenceAnimalsAntibodies, MonoclonalBinding SitesCatalysisCrystallizationCrystallography, X-RayHaptensImmunoglobulin Fab FragmentsImmunoglobulin Heavy ChainsImmunoglobulin Light ChainsMiceMice, Inbred BALB CModels, MolecularMolecular Sequence DataAntibodies, MonoclonalHaptensImmunoglobulin Fab FragmentsImmunoglobulin Heavy ChainsImmunoglobulin Light Chains

Identifiers

PMID8643580
PMCPMC39251
OpenAlexW2153046593

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.