Evidence map›Paper›PMID 8639753›Full record

ArticlePlant molecular biology1996

A low-temperature-responsive gene from barley encodes a protein with single-stranded nucleic acid-binding activity which is phosphorylated in vitro.

M A Dunn, K Brown, R Lightowlers, M A Hughes

Abstract read
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In one paragraph

Article in Plant molecular biology, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
  2. Genome-wide identification, phylogenetic analysis, and expression profiling of glycine-rich RNA-binding protein (GRPs) genes in seeded and seedless grapes (Physiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  3. Genome-Wide Association Study RevealsFrontiers in genetics · 2021
    Article
  4. Article
  5. Article
  6. Functional conservation of cold shock domains in bacteria and higher plants.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  7. Article
  8. Plants in a cold climate.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2002
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

M A DunnDepartment of Biochemistry, University of Newcastle upon Tyne, UK.
K Brown
R Lightowlers
M A Hughes
Newcastle University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A low-temperature-responsive gene, blt 801, isolated from a winter barley (Hordeum vulgare L.) cDNA library prepared from leaf meristematic tissue, was sequenced. The deduced amino acid sequence predicts a glycine-rich RNA-binding protein (GR-RNP) which was homology to stress-responsive GR-RNPs from several other plant species. BLT 801 is a two-domain protein, the amino-terminal domain comprises a consensus RNA-binding domain similar to that found in many eukaryotic genes and the carboxy-terminal domain is extremely glycine-rich (68.5% glycine). Blt 801 mRNA also accumulates in response to the phytohormone abscisic acid. The protein encoded by blt 801 has been produced as a recombinant fusion protein using a bacterial expression vector. The fusion protein, a chimaera of glutathione S-transferase and BLT 801, has been used in studies to determine nucleic acid binding and other characteristics. Binding studies with single-stranded nucleic acids show that BLT 801 has affinity for homoribopolymers G, A and U but not C, it also binds to single-stranded DNA and selects RNA molecules containing open loop structures enriched in adenine but low in cytosine. Blt 801 has a consensus motif for phosphorylation by cAMP protein kinase (PKA) at the junction between the two domains which can be phosphorylated by PKA in vitro and which, by analogy to animal studies, may have significance for controlling enzyme function.

Indexed as

Amino Acid SequenceBase SequenceBlotting, NorthernCyclic AMP-Dependent Protein KinasesDNA-Binding ProteinsDNA, ComplementaryDNA, Single-StrandedHordeumMolecular Sequence DataPhosphorylationPlant ProteinsRNA-Binding ProteinsSequence Homology, Amino AcidBLT 801 protein, Hordeum vulgareCyclic AMP-Dependent Protein KinasesDNA-Binding ProteinsDNA, ComplementaryDNA, Single-StrandedPlant ProteinsRNA-Binding Proteins

Identifiers

PMID8639753
OpenAlexW2001867058

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.