Evidence map›Paper›PMID 8628309›Full record

ArticleMolecular and cellular biology1996

Common core sequences are found in skeletal muscle slow- and fast-fiber-type-specific regulatory elements.

M Nakayama, J Stauffer, J Cheng, S Banerjee-Basu, E Wawrousek, A Buonanno

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 77 citations in OpenAlex.

  1. Ets2 Is an Activity-Dependent Transcriptional Regulator of a Fast-Twitch Muscle Program.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
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  8. Excitation-transcription coupling in skeletal muscle: the molecular pathways of exercise.Biological reviews of the Cambridge Philosophical Society · 2011
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  10. Activity-dependent repression of muscle genes by NFAT.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  11. Article
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  13. Structure and regulation of human troponin genes.Molecular and cellular biochemistry · 2004
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

M NakayamaUnit on Molecular Neurobiology, National Institute of Child Health and Human Development, Bethesda, Maryland 20892, USA.
J Stauffer
J Cheng
S Banerjee-Basu
E Wawrousek
A Buonanno
Eunice Kennedy Shriver National Institute of Child Health and Human Development · USHealth and Human Development (2HD) Research Network · CM

Funding

NATIONAL TRANSGENIC MOUSE FACILITYN01HD002911 · NICHD · DNX, INC. · PI SWANSON, MARK · 1990 to 1995
–
NICHD NIH HHS N01-HD-0-2911
6 · The paper itself

Abstract

The molecular mechanisms generating muscle diversity during development are unknown. The phenotypic properties of slow- and fast-twitch myofibers are determined by the selective transcription of genes coding for contractile proteins and metabolic enzymes in these muscles, properties that fail to develop in cultured muscle. Using transgenic mice, we have identified regulatory elements in the evolutionarily related troponin slow (TnIs) and fast (TnIf) genes that confer specific transcription in either slow or fast muscles. Analysis of serial deletions of the rat TnIs upstream region revealed that sequences between kb -0.95 and -0.5 are necessary to confer slow-fiber-specific transcription; the -0.5-kb fragment containing the basal promoter was inactive in five transgenic mouse lines tested. We identified a 128-bp regulatory element residing at kb -0.8 that, when linked to the -0.5-kb TnIs promoter, specifically confers transcription to slow-twitch muscles. To identify sequences directing fast-fiber-specific transcription, we generated transgenic mice harboring a construct containing the TnIs kb -0.5 promoter fused to a 144-bp enhancer derived from the quail TnIf gene. Mice harboring the TnIf/TnIs chimera construct expressed the transgene in fast but not in slow muscles, indicating that these regulatory elements are sufficient to confer fiber-type-specific transcription. Alignment of rat TnIs and quail TnIf regulatory sequences indicates that there is a conserved spatial organization of core elements, namely, an E box, a CCAC box, a MEF-2-like sequence, and a previously uncharacterized motif. The core elements were shown to bind their cognate factors by electrophoretic mobility shift assays, and their mutation demonstrated that the TnIs CCAC and E boxes are necessary for transgene expression. Our results suggest that the interaction of closely related transcriptional protein-DNA complexes is utilized to specify fiber type diversity.

Indexed as

Point MutationPromoter Regions, GeneticRegulatory Sequences, Nucleic AcidTranscription, GeneticAnimalsBase SequenceBiological EvolutionChloramphenicol O-AcetyltransferaseConserved SequenceDNA PrimersMiceMice, TransgenicMolecular Sequence DataMuscle Fibers, Fast-TwitchMuscle Fibers, Slow-TwitchMuscle, SkeletalChloramphenicol O-AcetyltransferaseDNA PrimersTroponinTroponin I

Identifiers

PMID8628309
PMCPMC231230
OpenAlexW2148377122

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.