Evidence map›Paper›PMID 8627789›Full record

ArticleJournal of virology1996

Genetic characterization of human immunodeficiency virus type 1 in blood and genital secretions: evidence for viral compartmentalization and selection during sexual transmission.

T Zhu, N Wang, A Carr, D S Nam, R Moor-Jankowski, D A Cooper, D D Ho

Abstract readComparative Study
In one paragraph

Article in Journal of virology, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 145 papers.

0numbers the graph read from it
0cells of the map it votes in
145citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

145 citing papers in PubMed.

  1. Modelling HIV-1 2-LTR dynamics following raltegravir intensification.Journal of the Royal Society, Interface · 2013
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85 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

T ZhuAaron Diamond AIDS Research Center, New York, New York 10016, USA.
N Wang
A Carr
D S Nam
R Moor-Jankowski
D A Cooper
D D Ho

Funding

VIROLOGY AND IMMUNOLOGY OF ACUTE HIV1 INFECTIONR01AI035522 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI PETERSON, DOLORES MURL · 1994 to 2006
$2.7M
VIROLOGY AND IMMUNOLOGY OF ACUTE HIV1 INFECTIONR37AI035522 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI KOUP, RICHARD A. · 1998 to 2000
$373k
HIV DOMAINS IMPORTANT FOR ANTIBODY NEUTRALIZATIONR01AI025541 · NIAID · CEDARS-SINAI MEDICAL CENTER · PI HO, DAVID D · 1988 to 1995
–
NIAID NIH HHS AI25541NIAID NIH HHS AI35522NIAID NIH HHS AI45218
6 · The paper itself

Abstract

To explore the mechanism of sexual transmission of human immunodeficiency virus type 1 (HIV-1), we compared HIV-1 gp120 sequences in longitudinal samples from five acute seroconvertors with those from their corresponding sexual partners (transmitters). We used a quantitative homoduplex tracking assay to compare the overall genetic composition of HIV-1 quasispecies in each transmission pair and to track the transmitted viruses during the acute and asymptomatic stages of HIV-1 infection. In the chronically infected transmitters, HIV-1 variants in genital secretions differed from those in blood and variants in cells differed from those in cell-free plasma, indicating remarkable sequence heterogeneity in these subjects as well as compartmentalization of the virus in different bodily sites. Conversely, two of five seroconvertors had only a few related variants and three of five harbored only one viral population, indicating that in these subjects the transmitted viruses were typically homogeneous. Transmitted viruses were evident in the donor's seminal plasma (one of five cases) and even more so in their seminal cells (three of five cases), suggesting that both cell-associated and cell-free viruses can be transmitted. In every pair studied, the transmitted variant(s) represents only a minor population in the semen of the corresponding transmitter, thereby providing evidence that HIV-1 selection indeed occurs during sexual transmission.

Indexed as

Sexual BehaviorAmino Acid SequenceBase SequenceBloodCloning, MolecularDNA PrimersFemaleHIV-1HIV Envelope Protein gp120HIV SeropositivityHomosexuality, MaleHumansLymphocytesMaleMolecular Sequence DataPolymerase Chain ReactionDNA PrimersHIV Envelope Protein gp120RNA, Viral

Identifiers

PMID8627789
PMCPMC190172

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.