Evidence map›Paper›PMID 8622684›Full record

ArticleMolecular and cellular biology1996

A DNA-bending protein interacts with an essential upstream regulatory element of the human embryonic beta-like globin gene.

M A Dyer, R Naidoo, R J Hayes, C J Larson, G L Verdine, M H Baron

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Septamer element-binding proteins in neuronal and glial differentiation.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2000
    Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

M A DyerDepartment of Molecular and Cellular Biology, Harvard University, Cambridge, Massachusetts 02138, USA.
R Naidoo
R J Hayes
C J Larson
G L Verdine
M H Baron
Harvard University · US

Funding

FUNCTIONALLY TETHERED OLIGONUCLEOTIDESR01GM044853 · NIGMS · HARVARD UNIVERSITY · PI VERDINE, GREGORY LAWRENCE · 1990 to 2011
$5.1M
MOLECULAR DETERMINANTS OF HUMAN BETA GLOBIN GENE SWITCHIR01GM042413 · NIGMS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI BARON, MARGARET H. · 1989 to 1999
–
NIGMS NIH HHS GM 07598NIGMS NIH HHS R01 GM42413NIGMS NIH HHS R01 GM44853
6 · The paper itself

Abstract

The mammalian beta-like globin gene family has served as an important model system for analysis of tissue- and developmental state-specific gene regulation. Although the activities of a number of regulatory proteins have been implicated in the erythroid cell-specific transcription of globin genes, the mechanisms that restrict their expression to discrete stages of development are less well understood. We have previously identified a novel regulatory element (PRE II) upstream from the human embryonic beta-like globin gene (epsilon) that synergizes with other sequences to confer tissue- and stage-specific expression on a minimal epsilon-globin gene promoter in cultured embryonic erythroid cells. Binding of an erythroid nuclear protein (PRE II-binding factor [PRE-IIBF]) to the PRE II control element is required for promoter activation. Here we report on some of the biochemical properties of PREIIBF, including the characterization of its specificity and affinity for DNA. The embryonic and adult forms of PREIIBF recognize their cognate sequences with identical specificities, supporting our earlier conclusion that they are very similar proteins. PREIIBF binds DNA as a single polypeptide with an Mr of approximately 80,000 to 85,000 and introduces a bend into the target DNA molecule. These results suggest a mechanism by which PREIIBF may contribute to the regulation of the embryonic beta-like globin gene within the context of a complex locus.

Indexed as

Base SequenceCell LineDNA-Binding ProteinsEmbryo, MammalianErythrocytesFemaleGene Expression Regulation, DevelopmentalGlobinsHumansMolecular Sequence DataPregnancyRegulatory Sequences, Nucleic AcidDNA-Binding ProteinsGlobins

Identifiers

PMID8622684
PMCPMC231063
OpenAlexW1790393160

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.