Evidence map›Paper›PMID 8606183›Full record

ArticleJournal of bacteriology1996

glc locus of Escherichia coli: characterization of genes encoding the subunits of glycolate oxidase and the glc regulator protein.

M T Pellicer, J Badía, J Aguilar, L Baldomà

Abstract read
In one paragraph

Article in Journal of bacteriology, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed.

  1. Review
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  13. Novel aspects of ethylene glycol catabolism.Applied microbiology and biotechnology · 2024
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  14. Transcriptional and Metabolic Response of a Strain ofBiotech (Basel (Switzerland)) · 2024
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  15. The L-lactate dehydrogenases ofbioRxiv : the preprint server for biology · 2024
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  16. Synthetic biology (Oxford, England) · 2024
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  18. Community context and pCOISME communications · 2022
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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

M T PellicerDepartment of Biochemistry, Faculty of Pharmacy, University of Barcelona, Spain.
J Badía
J Aguilar
L Baldomà

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The locus glc (min 64.5), associated with the glycolate utilization trait in Escherichia coli, is known to contain glcB, encoding malate synthase G, and the gene(s) needed for glycolate oxidase activity. Subcloning, sequencing, insertion mutagenesis, and expression studies showed five additional genes: glcC and in the other direction glcD, glcE, glcF, and glcG followed by glcB. The gene glcC may encode the glc regulator protein. Consistently a chloramphenicol acetyltransferase insertion mutation abolished both glycolate oxidase and malate synthase G activities. The proteins encoded from glcD and glcE displayed similarity to several flavoenzymes, the one from glcF was found to be similar to iron-sulfur proteins, and that from glcG had no significant similarity to any group of proteins. The insertional mutation by a chloramphenicol acetyltransferase cassette in either glcD, glcE, or glcF abolished glycolate oxidase activity, indicating that presumably these proteins are subunits of this enzyme. No effect on glycolate metabolism was detected by insertional mutation in glcG. Northern (RNA) blot experiments showed constitutive expression of glcC but induced expression for the structural genes and provided no evidence for a single polycistronic transcript.

Indexed as

Alcohol OxidoreductasesAmino Acid SequenceBase SequenceDNA, BacterialEscherichia coliGenes, BacterialGenes, RegulatorGlycolatesMolecular Sequence DataMutationOperonTranscription, GeneticAlcohol OxidoreductasesDNA, BacterialGlycolatesglycolic acidglycollate oxidase

Identifiers

PMID8606183
PMCPMC177904

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.