Evidence map›Paper›PMID 8580311›Full record

ArticleBiophysical journal1995

Interpreting photoactivated fluorescence microscopy measurements of steady-state actin dynamics.

Y Tardy, J L McGrath, J H Hartwig, C F Dewey

Abstract read
In one paragraph

Article in Biophysical journal, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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  5. Article
  6. Image based validation of dynamical models for cell reorientation.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2015
    Article
  7. Article
  8. Article
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  11. Article
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  14. Inside view of cell locomotion through single-molecule: fast F-/G-actin cycle and G-actin regulation of polymer restoration.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2010
    Review
  15. Article
  16. A finite element model for protein transport in vivo.Biomedical engineering online · 2007
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Y TardyDepartment of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge 02139, USA.
J L McGrath
J H Hartwig
C F Dewey

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A continuum model describing the steady-state actin dynamics of the cytoskeleton of living cells has been developed to aid in the interpretation of photoactivated fluorescence experiments. In a simplified cell geometry, the model assumes uniform concentrations of cytosolic and cytoskeletal actin throughout the cell and no net growth of either pool. The spatiotemporal evolution of the fluorescent actin population is described by a system of two coupled linear partial-differential equations. An analytical solution is found using a Fourier-Laplace transform and important limiting cases relevant to the design of experiments are discussed. The results demonstrate that, despite being a complex function of the parameters, the fluorescence decay in photoactivated fluorescence experiments has a biphasic behavior featuring a short-term decay controlled by monomer diffusion and a long-term decay governed by the monomer exchange rate between the polymerized and unpolymerized actin pools. This biphasic behavior suggests a convenient mechanism for extracting the parameters governing the fluorescence decay from data records. These parameters include the actin monomer diffusion coefficient, filament turnover rate, and ratio of polymerized to unpolymerized actin.

Indexed as

ActinsAnimalsBiophysical PhenomenaBiophysicsBiopolymersCytoskeletonHumansMathematicsMicroscopy, FluorescenceModels, BiologicalPhotochemistryProtein ConformationActinsBiopolymers

Identifiers

PMID8580311
PMCPMC1236401

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.