ArticleProceedings of the National Academy of Sciences of the United States of America1996
DANA elements: a family of composite, tRNA-derived short interspersed DNA elements associated with mutational activities in zebrafish (Danio rerio).
Article in Proceedings of the National Academy of Sciences of the United States of America, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
13 citing papers in PubMed, 68 citations in OpenAlex.
- Lsh Is Essential for Maintaining Global DNA Methylation Levels in Amphibia and Fish and Interacts Directly with Dnmt1.BioMed research international · 2015Article
- Inverse PCR-based method for isolating novel SINEs from genome.Molecular biotechnology · 2014Article
- Decrease in cytosine methylation at CpG island shores and increase in DNA fragmentation during zebrafish aging.Age (Dordrecht, Netherlands) · 2014Article
- Analysis of the use of codon pairs in the HE gene of the ISA virus shows a correlation between bias in HPR codon-pair use and mortality rates caused by the virus.Virology journal · 2013Article
- SINEBase: a database and tool for SINE analysis.Nucleic acids research · 2013Article
- RNA-Mediated Gene Duplication and Retroposons: Retrogenes, LINEs, SINEs, and Sequence Specificity.International journal of evolutionary biology · 2013Article
- The role of transposable elements in the evolution of non-mammalian vertebrates and invertebrates.Genome biology · 2010Article
- Loss of Dnmt1 catalytic activity reveals multiple roles for DNA methylation during pancreas development and regeneration.Developmental biology · 2009Article
- Transposon tools hopping in vertebrates.Briefings in functional genomics & proteomics · 2008Review
- Mrf4 (myf6) is dynamically expressed in differentiated zebrafish skeletal muscle.Gene expression patterns : GEP · 2007Article
- In silico and in situ characterization of the zebrafish (Danio rerio) gnrh3 (sGnRH) gene.BMC genomics · 2002Article
- V-SINEs: a new superfamily of vertebrate SINEs that are widespread in vertebrate genomes and retain a strongly conserved segment within each repetitive unit.Genome research · 2002Article
- Classical and molecular cytogenetics of the zebrafish, Danio rerio (Cyprinidae, Cypriniformes): an overview.Genetica · 2001Review
Corrections and comments
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
Abstract
DNA is the first SINE isolated from zebrafish (Danio rerio) exhibiting all the hallmarks of these tRNA-derived elements. DANA is unique in its clearly defined substructure of distinct cassettes. In contrast to generic SINE elements, DANA appears to have been assembled by insertions of short sequences into a progenitor, tRNA-derived element. Once associated with each other, these subunits were amplified as a new transposable element with such a remarkable success that DANA-related sequences comprise approximately 10% of the modern zebrafish genome. At least some of the sequences comprised by the full-length element were capable of movement, forming a new group of mobile, composite transposons, one of which caused an insertional mutation in the zebrafish no tail gene. Being present only in the genus Danio, and estimated to be as old as the genus itself, DANA may have played a role in Danio speciation by massive amplification and genome-wide dispersion. There are extensive DNA polymorphisms between zebrafish populations and strains detected by PCR amplification using primers specific to DANA, suggesting that the DANA element will be useful as a molecular tool for genetic and phylogenetic analyses.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.