Evidence map›Paper›PMID 8552631›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1996

The transcriptional transactivator of simian foamy virus 1 binds to a DNA target element in the viral internal promoter.

J X Zou, P A Luciw

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1996. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

J X ZouDepartment of Medical Pathology, University of California, Davis 95616, USA.
P A Luciw
University of California Davis Medical Center · US

Funding

ZONA PELLUCIDA PEPTIDES AS IMMUNOCONTRACEPTIVE ANTIGENSP51RR000169 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI HYDE, DALLAS MELVIN · 1985 to 2011
$126.2M
REGULATION OF SIMIAN FOAMY VIRUS GENE EXPRESSIONR01AI030525 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI LUCIW, PAUL A · 1992 to 1996
–
COMPREHENSIVE TRAINING PROGRAM IN BIOMOLECULAR ENGINEERIT32GM008343 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI DOI, ROY H · 1990 to 1997
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NCRR NIH HHS RR00169NIAID NIH HHS R01-AI30525NIGMS NIH HHS T32-GM08343
6 · The paper itself

Abstract

The transcriptional transactivator (Tas) of simian foamy virus type 1 strongly augments gene expression directed by both the promoter in the viral long terminal repeat and the newly discovered internal promoter located within the env gene. A region of 121 bp, located immediately 5' to the TATA box in the internal promoter, is required for transactivation by Tas. The present study aimed to identify the precise Tas-responsive target(s) in this region and to determine the role of Tas in transcriptional regulation. By analysis of both clustered-site mutations and hybrid promoters in transient expression assays in murine and simian cells, two separate sequence elements within this 121-bp region were shown to be Tas-dependent transcriptional enhancers. These targets, each < 30 bp in length and displaying no apparent sequence homology one to the other, are designated the promoter-proximal and promoter-distal elements. By means of the gel electrophoresis mobility-shift assays, using purified glutathione S-transferase-Tas fusion protein expressed in Escherichia coli, the target proximal to the TATA box exhibited strong binding to glutathione S-transferase-Tas, whereas the distal element appears not to bind. In addition, footprint analysis revealed that 26 bp in the promoter proximal element was protected by glutathione S-transferase-Tas from DNase I. We propose a model for transactivation of the simian foamy virus type 1 internal promoter in which Tas interacts directly with the proximal target element positioned immediately 5' to the TATA box. In this model, Tas attached to this element is presumed to interact with a component(s) of the cellular RNA polymerase II initiation complex and thereby enhance transcription directed by the viral internal promoter.

Indexed as

Gene Expression Regulation, ViralPromoter Regions, GeneticTranscriptional ActivationBase SequenceBinding SitesDNA-Binding ProteinsDNA, ViralMolecular Sequence DataRetroviridae ProteinsSpumavirusTrans-ActivatorsTranscription, Geneticbel1 protein, Human foamy virusDNA-Binding ProteinsDNA, ViralRetroviridae ProteinsTrans-Activators

Identifiers

PMID8552631
PMCPMC40231
OpenAlexW2064134861

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.