Evidence map›Paper›PMID 8524265›Full record

ArticleMolecular and cellular biology1995

Effects of mutations in the Saccharomyces cerevisiae RNA14, RNA15, and PAP1 genes on polyadenylation in vivo.

E Mandart, R Parker

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 57 citations in OpenAlex.

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  8. The export factor Yra1 modulates mRNA 3' end processing.Nature structural & molecular biology · 2011
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

E MandartDepartment of Molecular and Cellular Biology, University of Arizona, Tucson 85721, USA.
R Parker
Howard Hughes Medical Institute · USUniversity of Arizona · US

Funding

Stress Granules in Yeast and MammalsR01GM045443 · NIGMS · UNIVERSITY OF COLORADO · PI PARKER, ROY · 1991 to 2021
$3.3M
mRNA Decapping in YeastR37GM045443 · NIGMS · UNIVERSITY OF COLORADO · PI PARKER, ROY · 2004 to 2013
$3.1M
NIGMS NIH HHS GM 45443
6 · The paper itself

Abstract

The RNA14 and RNA15 gene products have been implicated in a variety of cellular processes. Mutations in these genes lead to faster decay of some mRNAs and yield extracts that are deficient in cleavage and polyadenylation in vitro. These results suggest that the RNA14 and RNA15 gene products may be involved in both adenylation and deadenylation in vivo. To explore the roles of these gene products in vivo, we examined the site of adenylation and the rate of deadenylation for individual mRNAs in rna14 and rna15 mutant strains. We observed that the rates of deadenylation are not affected by lesions in either the RNA14 or the RNA15 gene. This result suggests that the proteins encoded by these genes are not involved in regulation of the deadenylation rate. In contrast, we observed that the site of adenylation for the ACT1 transcript can be altered in these mutants. Interestingly, we also observed that mutation of the poly(A) polymerase gene altered the site of ACT1 polyadenylation. These observations suggest that the RNA14, RNA15, and PAP1 proteins are involved in poly(A) site choice. This alteration in poly(A) site choice in the rna14 mutant can be corrected by the ssm4 suppressor, indicating that this suppression acts at the level of polyadenylation and not by slowing mRNA degradation.

Indexed as

Amino Acid Transport SystemsGenes, FungalmRNA Cleavage and Polyadenylation FactorsPolynucleotide AdenylyltransferaseSaccharomyces cerevisiae ProteinsBase SequenceFungal ProteinsMembrane ProteinsMolecular Sequence DataMutagenesis, Site-DirectedNuclear ProteinsOligodeoxyribonucleotidesPancreatitis-Associated ProteinsRNA, MessengerSaccharomyces cerevisiaeAmino Acid Transport SystemsBAP3 protein, S cerevisiaeFungal ProteinsMembrane ProteinsmRNA Cleavage and Polyadenylation FactorsNuclear ProteinsOligodeoxyribonucleotidesPancreatitis-Associated ProteinsPAP1 protein, S cerevisiaePolynucleotide AdenylyltransferaseREG3A protein, humanRNA14 protein, S cerevisiaeRNA15 protein, S cerevisiaeRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID8524265
PMCPMC230953
OpenAlexW1844843076

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.