Evidence map›Paper›PMID 8524221›Full record

ArticleMolecular and cellular biology1995

Ubiquitous and neuronal DNA-binding proteins interact with a negative regulatory element of the human hypoxanthine phosphoribosyltransferase gene.

D E Rincón-Limas, F Amaya-Manzanares, M L Niño-Rosales, Y Yu, T P Yang, P I Patel

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

D E Rincón-LimasDepartment of Neurology, Baylor College of Medicine, Houston, Texas 77030, USA.
F Amaya-Manzanares
M L Niño-Rosales
Y Yu
T P Yang
P I Patel
Baylor College of Medicine · USUniversity of Florida · US

Funding

TRANSCRIPTIONAL REGULATION BY X CHROMOSOME INACTIVATIONR01GM044286 · NIGMS · UNIVERSITY OF FLORIDA · PI YANG, THOMAS P · 1991 to 2004
$1.2M
FACTORS REGULATING HPRT GENE EXPRESSIONR01AR041996 · NIAMS · BAYLOR COLLEGE OF MEDICINE · PI PATEL, PRAGNA · 1993 to 1996
–
NIAMS NIH HHS R01AR41996NIGMS NIH HHS GM44286
6 · The paper itself

Abstract

The hypoxanthine phosphoribosyltransferase (HPRT) gene is constitutively expressed at low levels in all tissues but at higher levels in the brain; the significance and mechanism of this differential expression are unknown. We previously identified a 182-bp element (hHPRT-NE) within the 5'-flanking region of the human HPRT (hHPRT) gene, which is involved not only in conferring neuronal specificity but also in repressing gene expression in nonneuronal tissues. Here we report that this element interacts with different nuclear proteins, some of which are present specifically in neuronal cells (complex I) and others of which are present in cells showing constitutive expression of the gene (complex II). In addition, we found that complex I factors are expressed in human NT2/D1 cells following induction of neuronal differentiation by retinoic acid. This finding correlates with an increase of HPRT gene transcription following neuronal differentiation. We also mapped the binding sites for both complexes to a 60-bp region (Ff; positions -510 to -451) which, when analyzed in transfection assays, functioned as a repressor element analogous to the full-length hHPRT-NE sequence. Methylation interference footprintings revealed a minimal unique DNA motif, 5'-GGAAGCC-3', as the binding site for nuclear proteins from both neuronal and nonneuronal sources. However, site-directed mutagenesis of the footprinted region indicated that different nucleotides are essential for the associations of these two complexes. Moreover, UV cross-linking experiments showed that both complexes are formed by the association of several different proteins. Taken together, these data suggest that differential interaction of DNA-binding factors with this regulatory element plays a crucial role in the brain-preferential expression of the gene, and they should lead to the isolation of transcriptional regulators important in neuronal expression of the HPRT gene.

Indexed as

Gene Expression Regulation, EnzymologicRegulatory Sequences, Nucleic AcidBase SequenceBrainCell DifferentiationCell LineChloramphenicol O-AcetyltransferaseDNA-Binding ProteinsDNA PrimersHumansHypoxanthine PhosphoribosyltransferaseLiverMolecular Sequence DataMutagenesis, Site-DirectedNeuronsOrgan SpecificityChloramphenicol O-AcetyltransferaseDNA-Binding ProteinsDNA PrimersHypoxanthine PhosphoribosyltransferaseRecombinant Proteins

Identifiers

PMID8524221
PMCPMC230909
OpenAlexW2104224063

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.