Evidence map›Paper›PMID 8506361›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1993

Rapid identification of proteins.

G Shaw

Abstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Teaching molecular genetics: Chapter 3--Proteomics in nephrology.Pediatric nephrology (Berlin, Germany) · 2006
    Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

G ShawUniversity of Florida College of Medicine, Department of Neuroscience, Gainesville 32610.

Funding

NEUROFILAMENT MODIFICATIONS: EXTENT AND SIGNIFICANCER01NS022695 · NINDS · UNIVERSITY OF FLORIDA · PI SHAW, GERRY · 1985 to 1995
–
NINDS NIH HHS NS22695
6 · The paper itself

Abstract

The amino acid composition, molecular weight, and isoelectric point of a protein can all be easily and economically determined by current electrophoretic techniques. A method which uses such easily obtained data to identify proteins is described. A computer program first corrects for systematic errors in amino acid quantitation and then searches the current sequence database for proteins with amino acid compositions similar to the corrected values, taking into account the reliability of determination of each amino acid. The program also provides the calculated molecular weight, isoelectric point, and name of each candidate, providing three further independent criteria for protein identification. The program is surprisingly sensitive, and the composition data alone, if of good quality, usually suggest the correct protein as a strong candidate if it or a close homologue is present in the database. Further studies show that proteins in the current database have amino acid compositions distinct enough to allow this method to be generally applicable. The method is a quick and cost-effective first step in protein characterization and should become increasingly useful as the number of fully sequenced proteins continues to rise.

Indexed as

Amino Acid SequenceDatabases, BibliographicAmino AcidsAnimalsHumansMolecular WeightProteinsSequence Homology, Amino AcidAmino AcidsProteins

Identifiers

PMID8506361
PMCPMC46670

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.