Evidence map›Paper›PMID 8464899›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1993

Antibody-promoted dimerization bypasses the regulation of DNA binding by the heme domain of the yeast transcriptional activator HAP1.

L Zhang, O Bermingham-McDonogh, B Turcotte, L Guarente

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 46 citations in OpenAlex.

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  3. The Q-System: A Versatile Expression System for Drosophila.Methods in molecular biology (Clifton, N.J.) · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

L ZhangDepartment of Biology, Massachusetts Institute of Technology, Cambridge 02139.
O Bermingham-McDonogh
B Turcotte
L Guarente
Massachusetts Institute of Technology · US

Funding

MOLECULAR ANALYSIS OF TRANSCRIPTIONAL ACTIVATORS HAP1-4R01GM030454 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GUARENTE, LEONARD P · 1985 to 1998
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NIGMS NIH HHS GM30454
6 · The paper itself

Abstract

The yeast transcriptional activator HAP1 contains a DNA-binding domain homologous to the zinc finger of GAL4 and an adjacent regulatory domain that blocks DNA binding in the absence of the inducer heme. We show that short HAP1 fragments containing the zinc finger are unable to bind to DNA but can be rescued by antibody to the HAP1 zinc finger. These fragments are missing a coiled-coil sequence similar to that within the dimerization domain of GAL4 and dimerization domains of myosin heavy chain. We surmise that the antibody promotes DNA binding by bringing together two monomers. Interestingly, the antibody will also promote DNA binding of a larger HAP1 fragment containing the DNA-binding and the heme-regulatory domains. This suggests that the regulatory domain acts by preventing dimerization of HAP1 in the absence of heme. Consistent with this view is an in vivo assay that also reveals that heme promotes HAP1 dimerization in yeast cells.

Indexed as

AntibodiesSaccharomyces cerevisiae ProteinsTranscription FactorsAmino Acid SequenceAnimalsDNA-Binding ProteinsFungal ProteinsHemeMacromolecular SubstancesModels, StructuralMolecular Sequence DataPlasmidsProtein Structure, SecondarySaccharomyces cerevisiaeSequence Homology, Amino AcidTrans-ActivatorsAntibodiesDNA-Binding ProteinsFungal ProteinsGAL4 protein, S cerevisiaeHAP1 protein, S cerevisiaeHemeMacromolecular SubstancesSaccharomyces cerevisiae ProteinsTrans-ActivatorsTranscription Factors

Identifiers

PMID8464899
PMCPMC46194
OpenAlexW2059383375

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.