Evidence map›Paper›PMID 8464710›Full record

ArticleNucleic acids research1993

Comparative analysis of the locus control region of the rabbit beta-like gene cluster: HS3 increases transient expression of an embryonic epsilon-globin gene.

R Hardison, J Xu, J Jackson, J Mansberger, O Selifonova, B Grotch, J Biesecker, H Petrykowska, W Miller

Open access · greenAbstract readComparative Study
In one paragraph

Article in Nucleic acids research, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 43 citations in OpenAlex.

  1. Evolution of hemoglobin and its genes.Cold Spring Harbor perspectives in medicine · 2012
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Mitogen-activated protein kinases enhance long-range activation by the beta-globin locus control region.Proceedings of the National Academy of Sciences of the United States of America · 1998
    Article
  7. Synergism between hypersensitive sites confers long-range gene activation by the beta-globin locus control region.Proceedings of the National Academy of Sciences of the United States of America · 1997
    Article
  8. Article
  9. Reduction of two functional gamma-globin genes to one: an evolutionary trend in New World monkeys (infraorder Platyrrhini).Proceedings of the National Academy of Sciences of the United States of America · 1996
    Article
  10. Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

R HardisonDepartment of Molecular and Cell Biology, Pennsylvania State University, University Park 16802.
J Xu
J Jackson
J Mansberger
O Selifonova
B Grotch
J Biesecker
H Petrykowska
W Miller
Gene Therapy Laboratory · FRPennsylvania State University · US

Funding

IN VITRO STUDIES OF ERYTHROPOIETIN ACTIONR01HL044491 · NHLBI · UNIVERSITY OF NEW HAMPSHIRE · PI WOJCHOWSKI, DON MICHAEL · 1991 to 2020
$4.8M
ORGANIZATION AND EXPRESSION OF GLOBIN GENE LOCIR01DK027635 · NIDDK · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI HARDISON, ROSS C · 1986 to 2001
$472k
REGULATION AND EVOLUTION OF RABBIT GLOBIN GENESK04DK001589 · NIDDK · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI HARDISON, ROSS C · 1987 to 1991
–
NHLBI NIH HHS R01 HL44491NIDDK NIH HHS R01 DK27635NIDDK NIH HHS RCDA KO4 DK01589
6 · The paper itself

Abstract

The rabbit homolog to the locus control region (LCR) of the human beta-like globin gene cluster was isolated, and long segments containing the DNase I hypersensitive sites (HS) were sequenced. The order and spacing of HS4, HS3, HS2 and HS1 are conserved between rabbit and human. Alignment of these sequences with their homologs from human, goat, and mouse shows that very long segments of DNA match between species, for over a thousand base pairs on either side of the previously identified functional cores, indicating that some important functions are found outside the cores. The activity of rabbit HS2 and HS3 was tested by attaching each to a novel reporter gene constructed by inserting the luciferase coding region into the rabbit epsilon-globin gene. In contrast to previous reports showing no effect of human or mouse HS3 on transient expression, both the rabbit HS2 and HS3 DNA fragments separately increased transient expression from the epsilon-luciferase hybrid gene and expression from stably integrated constructs in K562 erythroleukemia cells.

Indexed as

Multigene FamilyRegulatory Sequences, Nucleic AcidAnimalsBase SequenceDeoxyribonuclease IDNAGlobinsHumansLuciferasesMolecular Sequence DataRabbitsSequence Homology, Nucleic AcidTumor Cells, CulturedDeoxyribonuclease IDNAGlobinsLuciferases

Identifiers

PMID8464710
PMCPMC309292
OpenAlexW2165979116

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.