Evidence map›Paper›PMID 8426117›Full record

ArticleThe Journal of experimental medicine1993

Somatic hypermutation of an immunoglobulin mu heavy chain transgene.

J Sohn, R M Gerstein, C L Hsieh, M Lemer, E Selsing

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
7.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 68 citations in OpenAlex.

  1. Elucidation of IgH intronic enhancer functions via germ-line deletion.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  2. A hallmark of active class switch recombination: transcripts directed by I promoters on looped-out circular DNAs.Proceedings of the National Academy of Sciences of the United States of America · 2001
    Article
  3. Article
  4. The promotion of V region hypermutation.The Journal of experimental medicine · 1997
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Analysis of somatic hypermutation in mouse Peyer's patches using immunoglobulin kappa light-chain transgenes.Proceedings of the National Academy of Sciences of the United States of America · 1993
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

J SohnDepartment of Pathology, Tufts University School of Medicine, Boston, Massachusetts 02111.
R M Gerstein
C L Hsieh
M Lemer
E Selsing
Tufts University · US

Funding

IMMUNITY IN TRANSGENIC MICER01AI024465 · NIAID · TUFTS UNIVERSITY BOSTON · PI SELSING, ERIK · 1987 to 2010
$3.8M
NIAID NIH HHS AI-24465
6 · The paper itself

Abstract

We have analyzed somatic hypermutation of an immunoglobulin (Ig) heavy chain transgene. Hybridomas expressing the transgene were produced from immunized transgenic mice and transgene copies were sequenced to assay for mutation. In two IgM-producing hybridomas, as well as in several IgG-producing hybridomas, mutations were found in the VDJ region of the transgene. In the IgM-producing hybridomas, both mutated and unmutated transgene copies were present and expressed as mRNA. Several mutated transgene copies were present in a single cell and these showed different patterns of mutation. Two IgG-producing hybridomas isolated from a single animal also showed a hierarchical pattern of mutation indicating that transgene mutations can accumulate during B cell proliferation, similar to the mutational process for endogenous antibody genes. Among hybridomas that expressed both IgG and IgM molecules derived from the transgene, the isotype-switched gamma transgene copy exhibited a higher level of mutation than the mu transgene copies. Our results indicate that the 15-kb ARSmu transgene contains all the sequence information required to target the Ig-specific hypermutational machinery, and raise the possibility that sequences associated with the endogenous CH locus might enhance somatic mutation.

Indexed as

Genes, ImmunoglobulinAmino Acid SequenceAnimalsBase SequenceImmunoglobulin gamma-ChainsImmunoglobulin mu-ChainsImmunoglobulin Variable RegionMiceMice, TransgenicMolecular Sequence DataMutationOligodeoxyribonucleotidesImmunoglobulin gamma-ChainsImmunoglobulin mu-ChainsImmunoglobulin Variable RegionOligodeoxyribonucleotides

Identifiers

PMID8426117
PMCPMC2190889
OpenAlexW2159133915

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.