Evidence map›Paper›PMID 8417353›Full record

ArticleMolecular and cellular biology1993

Influence of CpG methylation and target spacing on V(D)J recombination in a transgenic substrate.

P Engler, A Weng, U Storb

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 74 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
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  9. Article
  10. The DNMT3B DNA methyltransferase gene is mutated in the ICF immunodeficiency syndrome.Proceedings of the National Academy of Sciences of the United States of America · 1999
    Article
  11. Article
  12. Article
  13. Review
  14. A cis-acting element that directs the activity of the murine methylation modifier locus Ssm1.Proceedings of the National Academy of Sciences of the United States of America · 1998
    Article
  15. Article
  16. Article
  17. Article
  18. A variable domain of delayed replication in FRAXA fragile X chromosomes: X inactivation-like spread of late replication.Proceedings of the National Academy of Sciences of the United States of America · 1997
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

P EnglerDepartment of Molecular Genetics and Cell Biology, University of Chicago, Illinois 60637.
A Weng
U Storb
University of Chicago · US

Funding

Multi-Disciplinary Training Grant in Cancer ResearchT32CA009594 · NCI · UNIVERSITY OF CHICAGO · PI KAY F MACLEOD, Scott A. Oakes · 1989 to 2026
$11.5M
CONTROL OF IMMUNOGLOBULIN SYNTHESISR37AI024780 · NIAID · UNIVERSITY OF CHICAGO · PI STORB, URSULA B · 1992 to 2001
$430k
EXPRESSION OF IMMUNOGLOBULIN GENES IN TRANSGENIC MICER01HD023089 · NICHD · UNIVERSITY OF CHICAGO · PI STORB, URSULA B · 1986 to 2000
$275k
CONTROL OF IMMUNOGLOBULIN SYNTHESISR01AI024780 · NIAID · UNIVERSITY OF CHICAGO · PI STORB, URSULA B · 1986 to 1990
–
NCI NIH HHS CA09594NIAID NIH HHS AI24780NICHD NIH HHS HD23089
6 · The paper itself

Abstract

We have previously described a line of transgenic mice with multiple head-to-tail copies of an artificial V-J recombination substrate and have shown that the methylation of this transgene is under the control of a dominant strain-specific modifier gene, Ssm-1. When the transgene array is highly methylated, no recombination is detectable, but when it is unmethylated, V-J joining is seen in the spleen, bone marrow, lymph nodes, and Peyer's patches but not in the thymus or nonlymphoid tissues, including brain tissue. Strikingly, in mice with partially methylated transgene arrays, rearrangement preferentially occurs in hypomethylated copies. Therefore, V-J recombination is negatively correlated with methylated DNA sequences. In addition, it appears that recombination occurs randomly between any two recombination signal sequences within the transgene array. This lack of target preference in an unselectable array of identical targets rules out simple mechanisms of one-dimensional tracking of a V(D)J recombinase complex.

Indexed as

Gene Rearrangement, B-LymphocyteGenes, ImmunoglobulinRecombination, Genetic5-MethylcytosineAnimalsBase SequenceCytosineMethylationMiceMice, TransgenicMolecular Sequence DataRestriction Mapping5-MethylcytosineCytosine

Identifiers

PMID8417353
PMCPMC358936
OpenAlexW1929595543

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.